Pre_GI: BLASTP Hits

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Query: NC_012125:2646792:2648824 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2648824, End: 2649561, Length: 738

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1164176:118230111823011183038738Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-123440
NC_003197:1207597:122608812260881226825738Salmonella typhimurium LT2, complete genomehypothetical protein5e-123440
NC_011149:1987291:198729119872911988028738Salmonella enterica subsp. enterica serovar Agona str. SL483,putative hydrolase5e-123440
NC_006905:1186895:120617412061741206911738Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein5e-123440
NC_004631:1842050:184408218440821844819738Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-123440
NC_011080:1209935:122787512278751228612738Salmonella enterica subsp. enterica serovar Newport str. SL254,putative hydrolase5e-123440
NC_006511:1770000:177205117720511772788738Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-123440
NC_010102:1979742:198177519817751982512738Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-123440
NC_003198:1117687:113636411363641137101738Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-123440
NC_011147:1763681:176723417672341767971738Salmonella enterica subsp. enterica serovar Paratyphi A strhydrolase5e-123440
NC_011205:2137696:214017221401722140909738Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hydrolase5e-123440
NC_011294:2009388:201186420118642012601738Salmonella enterica subsp. enterica serovar Enteritidis strhydrolase5e-123440
NC_016810:1163919:118222811822281182965738Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-123440
NC_016832:1838220:184111718411171841854738Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hydrolase5e-123440
NC_016856:1165941:118425011842501184987738Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hydrolase5e-123440
NC_016857:1163919:118222811822281182965738Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative hydrolase5e-123440
NC_016860:1205282:122377412237741224511738Salmonella enterica subsp. enterica serovar Typhimurium strputative hydrolase5e-123440
NC_016863:1165232:118354111835411184278738Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative hydrolase5e-123440
NC_011094:1166271:118439511843951185132738Salmonella enterica subsp. enterica serovar Schwarzengrund strhydrolase6e-123439
NC_011083:1216500:123043712304371231174738Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative hydrolase5e-122436
NC_010067:1782998:178501217850121785749738Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-120431
AC_000091:1083798:109912010991201099857738Escherichia coli W3110 DNA, complete genomepredicted zinc-binding hydrolase1e-111402
NC_000913:1087062:109810210981021098839738Escherichia coli K12, complete genomehypothetical protein1e-111402
NC_010468:2809125:281029628102962811033738Escherichia coli ATCC 8739, complete genomePHP domain protein6e-111400
NC_004337:1065609:107376010737601074497738Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-110399
NC_008258:1076922:109314010931401093877738Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-110399
NC_013716:1178383:119628011962801197017738Citrobacter rodentium ICC168, complete genomeputative phosphoesterase3e-109394
NC_016514:1701273:170400717040071704744738Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcdX2e-104378
NC_015663:3466471:350030035003003501040741Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative hydrolase2e-104378
NC_015968:1709680:171420017142001714937738Enterobacter asburiae LF7a chromosome, complete genomehydrolase ycdX3e-104377
NC_014121:2629075:264547226454722646209738Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completePHP family protein2e-103375
NC_010159:2546590:256620325662032566940738Yersinia pestis Angola, complete genomeputative phosphoesterase6e-97353
NC_004088:2491303:251107125110712511919849Yersinia pestis KIM, complete genomehypothetical protein5e-97353
NC_010465:2383219:240294024029402403677738Yersinia pseudotuberculosis YPIII, complete genomePHP domain protein4e-97353
NC_009381:1205900:122558412255841226321738Yersinia pestis Pestoides F chromosome, complete genomeputative hydrolase4e-97353
NC_009708:2347350:236583623658362366573738Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehydrolase4e-97353
NC_014029:2285323:230505923050592305796738Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-97353
NC_017168:3433804:345336734533673454104738Yersinia pestis A1122 chromosome, complete genomeputative hydrolase4e-97353
NC_017265:2213500:223273522327352233472738Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative zinc-binding hydrolase4e-97353
NC_016816:2782373:279550227955022796239738Pantoea ananatis LMG 5342, complete genomePHP domain-containing protein3e-91334
NC_009092:1599526:163408416340841634827744Shewanella loihica PV-4, complete genomePHP C-terminal domain protein2e-77288
NC_017160:2212806:223280222328022233296495Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-71267
NC_009778:2227627:227269522726952273147453Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-65248
NC_017047:1796000:179974817997481800167420Rahnella aquatilis HX2 chromosome, complete genomeputative hydrolase4e-56218
NC_014633:339181:348500348500349249750Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencePHP domain-containing protein4e-47187
NC_016894:2931213:295346229534622954217756Acetobacterium woodii DSM 1030 chromosome, complete genomeputative hydrolase4e-42171
NC_009778:2227627:223686522368652237239375Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-32137
NC_013517:3997448:401771140177114018442732Sebaldella termitidis ATCC 33386, complete genomePHP domain protein3e-29128
NC_017047:1796000:181092118109211811355435Rahnella aquatilis HX2 chromosome, complete genomeputative hydrolase5e-26117
NC_010001:69000:891228912289832711Clostridium phytofermentans ISDg, complete genomePHP domain protein7e-26117
NC_016816:2782373:278885227888522789136285Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-1686.3
NC_013216:4097056:411783341178334118570738Desulfotomaculum acetoxidans DSM 771, complete genomePHP domain protein4e-1478.6
NC_003551:154883:165843165843166553711Methanopyrus kandleri AV19, complete genomePredicted phosphatase of the PHP family1e-1273.6
NC_004557:2677155:269319926931992693960762Clostridium tetani E88, complete genomeputative DNA polymerase beta3e-1272
NC_016831:947281:98985298985298994089Salmonella enterica subsp. enterica serovar Gallinarum/pullorum3e-0962
NC_011274:2044000:20445262044526204461590Salmonella enterica subsp. enterica serovar Gallinarum str. 287/913e-0962
NC_009662:1285826:1304084130408413057991716Nitratiruptor sp. SB155-2, complete genomefamily X DNA polymerase IV5e-0858.2