Pre_GI: BLASTP Hits

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Query: NC_012125:1897611:1907725 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1907725, End: 1908525, Length: 801

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1690811:171560217156021716402801Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-147520
NC_011294:1220526:124433812443381245138801Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-147520
NC_011274:1299475:130851413085141309314801Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-147520
NC_011205:1391971:139743313974331398233801Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-147520
NC_010102:1137247:114768411476841148484801Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-147520
NC_010102:1829357:183882618388261839626801Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-147520
NC_011147:1057259:106772010677201068469750Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-136485
NC_006511:1063249:107371010737101074459750Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-136485