Pre_GI: BLASTP Hits

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Query: NC_012125:1632150:1654012 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1654012, End: 1655214, Length: 1203

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2235607:2237998223799822392001203Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein0834
NC_011149:2179592:2183395218339521845971203Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein0825
NC_016832:799764:819213819213820097885Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-169593
NC_003198:2179688:218379321837932184677885Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-169593
NC_004631:799810:819259819259820143885Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-169593
NC_006511:792543:812061812061812945885Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-168590
NC_011147:792489:812007812007812891885Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-168590
NC_008253:2198583:2206255220625522074691215Escherichia coli 536, complete genomeputative cytoplasmic protein3e-137488
NC_004431:2444972:2455722245572224569361215Escherichia coli CFT073, complete genomehypothetical protein6e-137487
NC_004129:5204500:5207174520717452084151242Pseudomonas fluorescens Pf-5, complete genomehypothetical protein4e-65248
NC_016832:799764:820097820097820399303Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-40165
NC_003198:2179688:218349121834912183793303Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-40165
NC_004631:799810:820143820143820445303Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-40165