Pre_GI: BLASTP Hits

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Query: NC_012125:1632150:1649576 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1649576, End: 1650319, Length: 744

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2235607:224289322428932243636744Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein3e-142503
NC_006511:792543:807631807631808368738Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-133475
NC_011149:2179592:218829021882902189027738Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-133473
NC_011147:792489:807586807586808314729Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-132469
NC_004631:799810:814829814829815542714Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-124445
NC_003198:2179688:218839421883942189107714Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-124445
NC_016832:799764:814975814975815496522Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-90331