Pre_GI: BLASTP Hits

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Query: NC_012125:1360593:1376512 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1376512, End: 1377825, Length: 1314

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2492168:2496452249645224977651314Salmonella enterica subsp. enterica serovar Enteritidis strlong-chain fatty acid outer membrane transporter0893
NC_011083:2542876:2547159254715925484721314Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,long-chain fatty acid transport protein0893
NC_011274:2483038:2487323248732324886361314Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91long-chain fatty acid outer membrane transporter0891
NC_011147:529458:5442465442465455591314Salmonella enterica subsp. enterica serovar Paratyphi A strlong-chain fatty acid outer membrane transporter0889
NC_006511:529424:5442125442125455251314Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCClong-chain fatty acid transport protein precursor0889
NC_004631:531254:5460415460415473541314Salmonella enterica subsp. enterica serovar Typhi Ty2, completelong-chain fatty acid transport protein precursor0889
NC_003198:2453074:2457358245735824586711314Salmonella enterica subsp. enterica serovar Typhi str. CT18,long-chain fatty acid transport protein precursor0889
NC_011205:2621415:2623560262356026248671308Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853long-chain fatty acid outer membrane transporter0888
NC_016832:531208:5459955459955473021308Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Long-chain fatty acid transport protein0885
NC_016831:531404:5462415462415475481308Salmonella enterica subsp. enterica serovar Gallinarum/pullorumlong-chain fatty acid transport protein0884
NC_011742:2489000:2489658248965824910041347Escherichia coli S88 chromosome, complete genomelong-chain fatty acid outer membrane transporter0828
NC_007946:2593500:2593836259383625951821347Escherichia coli UTI89, complete genomebifunctional long-chain fatty acids transporter0828
NC_008563:2565876:2566526256652625678721347Escherichia coli APEC O1, complete genomebifunctional long-chain fatty acids transporter0828
NC_011748:2655989:2660273266027326616191347Escherichia coli 55989, complete genomelong-chain fatty acid outer membrane transporter0827
CU928145:2655989:2660273266027326616191347Escherichia coli 55989 chromosome, complete genomelong-chain fatty acid outer membrane transporter0827
NC_011415:2732000:2736422273642227377681347Escherichia coli SE11 chromosome, complete genomelong-chain fatty acid outer membrane transporter0827
NC_010473:2548946:2551087255108725524331347Escherichia coli str. K-12 substr. DH10B, complete genomelong-chain fatty acid outer membrane transporter0827
AC_000091:2462461:2466746246674624680921347Escherichia coli W3110 DNA, complete genomelong-chain fatty acid outer membrane transporter0827
NC_000913:2455037:2459322245932224606681347Escherichia coli K12, complete genomelong-chain fatty acid outer membrane transporter0827
NC_013941:2928000:2928780292878029301261347Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransport of long-chain fatty acids0826
CP002516:1475521:1491463149146314928031341Escherichia coli KO11, complete genomemembrane protein involved in aromatic hydrocarbon degradation0823
CP002185:2608000:2613054261305426143941341Escherichia coli W, complete genomelong-chain fatty acid outer membrane transporter0823
NC_013361:3254000:3259127325912732604671341Escherichia coli O26:H11 str. 11368 chromosome, complete genomelong-chain fatty acid outer membrane transporter0823
NC_016902:1475521:1491463149146314928031341Escherichia coli KO11FL chromosome, complete genomearomatic hydrocarbon degradation membrane protein0823
NC_012759:2342986:2345133234513323464731341Escherichia coli BW2952 chromosome, complete genomelong-chain fatty acid outer membrane transporter0823
NC_015663:5253242:5257506525750652588341329Enterobacter aerogenes KCTC 2190 chromosome, complete genomelong-chain fatty acid outer membrane transporter0728
NC_014618:1452927:1464608146460814659481341Enterobacter cloacae SCF1 chromosome, complete genomearomatic hydrocarbon degradation membrane protein0701
NC_013716:2898434:2900567290056729019041338Citrobacter rodentium ICC168, complete genomelong-chain fatty acid transport protein0698
NC_009436:3117661:3121939312193931232731335Enterobacter sp. 638, complete genomelong-chain fatty acid outer membrane transporter0677
NC_015968:3277217:3281569328156932829151347Enterobacter asburiae LF7a chromosome, complete genomemembrane protein involved in aromatic hydrocarbon degradation0653
NC_016818:1291665:1315087131508713163641278Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completelong-chain fatty acid transport protein6e-171600
NC_010694:1250841:1273189127318912745291341Erwinia tasmaniensis, complete genomeLong-chain fatty acid transport protein6e-167587
NC_012917:3198000:3198219319821931995021284Pectobacterium carotovorum subsp. carotovorum PC1, complete genomemembrane protein involved in aromatic hydrocarbon degradation3e-162571
NC_013421:1545386:1561999156199915632461248Pectobacterium wasabiae WPP163, complete genomemembrane protein involved in aromatic hydrocarbon degradation5e-159560
NC_016513:1720006:1730878173087817323081431Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFadL protein1e-83310
NC_009901:4627998:4648523464852346498091287Shewanella pealeana ATCC 700345, complete genomemembrane protein involved in aromatic hydrocarbon degradation4e-55215
NC_016830:5109953:5112359511235951136301272Pseudomonas fluorescens F113 chromosome, complete genomeLong-chain fatty acid transport protein7e-45181
NC_014836:1551965:1557550155755015588901341Desulfurispirillum indicum S5 chromosome, complete genomemembrane protein involved in aromatic hydrocarbon degradation3e-41169
NC_017059:3355006:3375485337548533767891305Rhodospirillum photometricum DSM 122, complete genomeMembrane protein involved in aromatic hydrocarbon degradation1e-40167
NC_014733:1223359:1250968125096812522391272Methylovorus sp. MP688 chromosome, complete genomemembrane protein involved in aromatic hydrocarbon degradation2e-36154
NC_014758:310394:3460543460543473341281Calditerrivibrio nitroreducens DSM 19672 chromosome, completemembrane protein involved in aromatic hydrocarbon degradation5e-27122
NC_017505:96293:9808698086994801395Neisseria meningitidis alpha710 chromosome, complete genomeputative outer membrane transport protein7e-25115
NC_017514:96911:98704987041000981395Neisseria meningitidis M01-240149 chromosome, complete genomeouter membrane protein, OMPP1/FadL/TodX family7e-25115
NC_017518:98639:1004321004321018261395Neisseria meningitidis NZ-05/33 chromosome, complete genomeouter membrane protein, OMPP1/FadL/TodX family7e-25115
NC_017517:98554:1009621009621023531392Neisseria meningitidis M01-240355 chromosome, complete genomeouter membrane protein, OMPP1/FadL/TodX family2e-23110
NC_017516:96879:99841998411012411401Neisseria meningitidis H44/76 chromosome, complete genomeouter membrane protein, OMPP1/FadL/TodX family1e-22107
NC_017515:76861:1058211058211072211401Neisseria meningitidis M04-240196 chromosome, complete genomeouter membrane protein, OMPP1/FadL/TodX family1e-22107
NC_017501:96211:9786197861992611401Neisseria meningitidis 8013, complete genomehypothetical protein1e-22107
NC_003112:96815:99777997771011771401Neisseria meningitidis MC58, complete genomeputative outer membrane protein P11e-22107
NC_020063:2343813:2349854234985423510471194Enterobacteriaceae bacterium strain FGI 57, complete genomelong-chain fatty acid transport protein2e-22107
NC_008767:84950:8660086600880001401Neisseria meningitidis FAM18, complete genomeputative outer membrane transport protein5e-22105
NC_013173:2261396:2288722228872222899601239Desulfomicrobium baculatum DSM 4028, complete genomemembrane protein involved in aromatic hydrocarbon degradation1e-21104
NC_014121:2247913:2253001225300122541881188Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative fatty acid transport system, membrane protein2e-20100
NC_019940:2893535:2912861291286129141321272Thioflavicoccus mobilis 8321 chromosome, complete genomelong-chain fatty acid transport protein4e-1789.7
NC_020126:5470090:5490420549042054916131194Myxococcus stipitatus DSM 14675, complete genomeputative outer membrane protein P12e-1584
NC_012440:1841315:1841315184131518425621248Persephonella marina EX-H1, complete genomemembrane protein3e-1480.1
NC_009512:3282500:3291372329137232927541383Pseudomonas putida F1, complete genomemembrane protein involved in aromatic hydrocarbon degradation5e-1479.3
NC_009714:224325:2243252243252256321308Campylobacter hominis ATCC BAA-381, complete genomemembrane protein2e-1377.4
NC_011035:1974489:197787919778791978685807Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative outer membrane protein2e-1377.4
NC_017511:1883663:188705818870581887864807Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative outer membrane protein2e-1377.4
NC_012108:4417483:4425021442502144263221302Desulfobacterium autotrophicum HRM2, complete genomeFadL4e-1169.7
NC_007973:1411714:1422721142272114241151395Ralstonia metallidurans CH34 chromosome 1, complete sequencemembrane protein involved in aromatic hydrocarbon degradation2e-0860.8
NC_016147:1825827:1844879184487918462551377Pseudoxanthomonas spadix BD-a59 chromosome, complete genomearomatic hydrocarbon degradation membrane protein3e-0860.1
NC_008825:846916:8619128619128632851374Methylibium petroleiphilum PM1, complete genomelong-chain fatty acid transport like protein3e-0757
NC_014041:661352:6649996649996662491251Zunongwangia profunda SM-A87 chromosome, complete genomeOMPP1/FadL/TodX family outer membrane protein transport protein1e-0655.1
NC_007645:2204066:2220002222000222216241623Hahella chejuensis KCTC 2396, complete genomeLong-chain fatty acid transport protein1e-0654.7