Pre_GI: BLASTP Hits

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Query: NC_011991:65368:84516 Agrobacterium vitis S4 plasmid pAtS4b, complete sequence

Start: 84516, End: 84752, Length: 237

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012586:897148:903492903492904145654Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative carboxy-terminus of transposase for insertion sequence NGRIS-7f3e-1063.9