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Query: NC_011989:1638261 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1638261, End: 1664745, Length: 26485

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003063:13587381358738137982321086Agrobacterium tumefaciens str. C58 chromosome linear, complete3e-31145BLASTN svgBLASTP svg
NC_003305:69381069381071549621687Agrobacterium tumefaciens str. C58 chromosome linear, complete3e-31145BLASTN svgBLASTP svg
NC_015675:45655004565500458788322384Mesorhizobium opportunistum WSM2075 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg