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Query: NC_011989:1604939 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1604939, End: 1625159, Length: 20221

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010161:1368500*1368500138885420355Bartonella tribocorum CIP 105476, complete genome4e-39170BLASTN svgBLASTP svg
NC_010172:5447189*5447189548599938811Methylobacterium extorquens PA1, complete genome5e-32147BLASTN svgBLASTP svg
NC_014664:49390049390051632122422Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome8e-28133BLASTN svgBLASTP svg
NC_007626:2283793*2283793230659922807Magnetospirillum magneticum AMB-1, complete genome2e-25125BLASTN svgBLASTP svg
NC_015730:1107840*1107840113310925270Roseobacter litoralis Och 149 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013009:122000*12200014610024101Neorickettsia risticii str. Illinois, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007798:112840*11284013492522086Neorickettsia sennetsu str. Miyayama, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_005295:21995219954409922105Ehrlichia ruminantium str. Welgevonden, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006831:450045002319218693Ehrlichia ruminantium str. Gardel, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014935:1287494*1287494131489327400Nitratifractor saLSUginis DSM 16511 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004842:1132441*1132441116265130211Anaplasma marginale str. St. Maries, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014727:1512546*1512546153687124326Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,9e-0660BLASTN svgBLASTP svg