Pre_GI: BLASTP Hits

Some Help

Query: NC_011989:2262881:2286807 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 2286807, End: 2287643, Length: 837

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009720:622262:638452638452639264813Xanthobacter autotrophicus Py2, complete genomehypothetical protein9e-1374.3
NC_009654:1729159:173558317355831736311729Marinomonas sp. MWYL1, complete genomehypothetical protein4e-1272.4