Pre_GI: BLASTP Hits

Some Help

Query: NC_011989:2262881:2266323 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 2266323, End: 2266664, Length: 342

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010511:2703684:272194427219442722276333Methylobacterium sp. 4-46 chromosome, complete genomeantibiotic biosynthesis monooxygenase9e-25112
NC_015259:1803266:181981918198191820106288Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAntibiotic biosynthesis monooxygenase domain protein2e-24111
NC_012560:5338707:646264626767306Azotobacter vinelandii DJ, complete genomeAntibiotic biosynthesis monooxygenase protein3e-24110
NC_015276:3829059:384481038448103845112303Marinomonas mediterranea MMB-1 chromosome, complete genomeAntibiotic biosynthesis monooxygenase8e-24108
NC_013440:625867:647929647929648237309Haliangium ochraceum DSM 14365, complete genomeAntibiotic biosynthesis monooxygenase1e-1478.6
NC_007963:2777066:279609127960912796399309Chromohalobacter salexigens DSM 3043, complete genomeAntibiotic biosynthesis monooxygenase1e-0858.5
NC_011761:2344408:236474323647432365057315Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeantibiotic biosynthesis monooxygenase family protein3e-0754.3
NC_014171:1043961:106183310618331062330498Bacillus thuringiensis BMB171 chromosome, complete genomesignal transduction protein TRAP9e-0648.9
NC_011725:1055552:107542710754271075924498Bacillus cereus B4264 chromosome, complete genomehypothetical protein9e-0648.9