Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1664245 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1664245, End: 1664745, Length: 501

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010581:561579:576054576054576551498Beijerinckia indica subsp. indica ATCC 9039, complete genomepeptide deformylase3e-33140
NC_008260:125500:142342142342142848507Alcanivorax borkumensis SK2, complete genomepeptide deformylase6e-2096.7
NC_019970:1457794:145779414577941458273480Thermoanaerobacterium thermosaccharolyticum M0795, complete genomepeptide deformylase2e-1994.7
NC_013854:2714033:273246827324682732980513Azospirillum sp. B510, complete genomepeptide deformylase1e-1892.4
NC_013192:171000:171005171005171523519Leptotrichia buccalis DSM 1135, complete genomepeptide deformylase2e-1891.7
NC_010611:208268:210696210696211226531Acinetobacter baumannii ACICU, complete genomeN-formylmethionyl-tRNA deformylase6e-1786.7
NC_010410:3719599:373875537387553739285531Acinetobacter baumannii AYE, complete genomepeptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II))6e-1786.7
NC_007798:301456:320139320139320699561Neorickettsia sennetsu str. Miyayama, complete genomepeptide deformylase1e-1685.5
NC_009484:464342:464962464962465528567Acidiphilium cryptum JF-5 chromosome, complete genomepeptide deformylase2e-1685.1
NC_015186:573289:573918573918574475558Acidiphilium multivorum AIU301, complete genomepeptide deformylase2e-1685.1
NC_011992:3615517:363469936346993635211513Acidovorax ebreus TPSY, complete genomepeptide deformylase2e-1685.1
NC_012039:1399699:142201114220111422532522Campylobacter lari RM2100, complete genomepeptide deformylase8e-1682.8
NC_014924:3065430:307355030735503074092543Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomepeptide deformylase2e-1582
NC_013123:78786:104565104565105107543Candidatus Sulcia muelleri SMDSEM, complete genomepeptide deformylase4e-1580.9
NC_015138:5276857:529789952978995298408510Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completepeptide deformylase4e-1580.5
NC_013889:2603914:260893026089302609466537Thioalkalivibrio sp. K90mix chromosome, complete genomepeptide deformylase7e-1579.7
NC_011978:699500:722238722238722732495Thermotoga neapolitana DSM 4359, complete genomePeptide deformylase7e-1579.7
NC_008752:5213431:523272252327225233231510Acidovorax avenae subsp. citrulli AAC00-1, complete genomepeptide deformylase1e-1479
NC_009881:283500:285876285876286403528Rickettsia akari str. Hartford, complete genomepeptide deformylase2e-1478.2
NC_009012:686740:695212695212695724513Clostridium thermocellum ATCC 27405, complete genomepeptide deformylase6e-1477
NC_003103:266013:279505279505280032528Rickettsia conorii str. Malish 7, complete genomepeptide deformylase6e-1476.6
NC_015866:274550:285188285188285715528Rickettsia heilongjiangensis 054 chromosome, complete genomepeptide deformylase1e-1375.5
NC_012440:585568:590444590444590974531Persephonella marina EX-H1, complete genomepeptide deformylase1e-1375.5
NC_017058:1152361:116463611646361165163528Rickettsia australis str. Cutlack chromosome, complete genomepeptide deformylase1e-1375.5
NC_012730:293634:306459306459306986528Rickettsia peacockii str. Rustic, complete genomepeptide deformylase2e-1375.1
NC_009882:278384:283754283754284281528Rickettsia rickettsii str. 'Sheila Smith', complete genomepeptide deformylase2e-1375.1
NC_016639:274157:284663284663285190528Rickettsia slovaca 13-B chromosome, complete genomePolypeptide deformylase2e-1375.1
NC_016908:278457:283825283825284352528Rickettsia rickettsii str. Colombia chromosome, complete genomepeptide deformylase2e-1375.1
NC_016913:859931:884745884745885272528Rickettsia rickettsii str. Brazil chromosome, complete genomepeptide deformylase2e-1375.1
NC_017065:274165:284671284671285198528Rickettsia slovaca str. D-CWPP chromosome, complete genomepeptide deformylase2e-1375.1
NC_017043:990395:100111710011171001644528Rickettsia montanensis str. OSU 85-930 chromosome, complete genomepeptide deformylase2e-1375.1
NC_017187:1580988:159849315984931599008516Arcobacter butzleri ED-1, complete genomepeptide deformylase2e-1375.1
NC_018604:838932:861197861197861730534Brachyspira pilosicoli WesB complete genomepeptide deformylase3e-1374.7
NC_016931:269537:276698276698277225528Rickettsia massiliae str. AZT80 chromosome, complete genomepeptide deformylase3e-1374.7
NC_016915:278000:283468283468283995528Rickettsia rickettsii str. Hlp#2 chromosome, complete genomepeptide deformylase2e-1374.7
NC_017044:278500:283988283988284515528Rickettsia parkeri str. Portsmouth chromosome, complete genomepeptide deformylase2e-1374.7
NC_010263:278463:283833283833284360528Rickettsia rickettsii str. Iowa, complete genomepeptide deformylase3e-1374.3
NC_016909:278327:283698283698284225528Rickettsia rickettsii str. Arizona chromosome, complete genomepeptide deformylase3e-1374.3
NC_016911:278415:283786283786284313528Rickettsia rickettsii str. Hauke chromosome, complete genomepeptide deformylase3e-1374.3
NC_016914:278500:283919283919284446528Rickettsia rickettsii str. Hino chromosome, complete genomepeptide deformylase3e-1374.3
NC_012633:276500:281890281890282417528Rickettsia africae ESF-5, complete genomePolypeptide deformylase6e-1373.6
NC_014376:2921769:294945029494502949941492Clostridium saccharolyticum WM1 chromosome, complete genomepeptide deformylase5e-1373.6
NC_014033:675626:692194692194692754561Prevotella ruminicola 23 chromosome, complete genomepeptide deformylase5e-1373.6
NC_005125:2366778:238806323880632388626564Gloeobacter violaceus PCC 7421, complete genomepeptide deformylase5e-1373.6
NC_014643:1986440:198776619877661988338573Rothia dentocariosa ATCC 17931 chromosome, complete genomepeptide deformylase7e-1373.2
NC_003112:96815:118025118025118528504Neisseria meningitidis MC58, complete genomepeptide deformylase1e-1272.8
NC_008767:84950:106002106002106505504Neisseria meningitidis FAM18, complete genomepolypeptide deformylase1e-1272.8
NC_017501:96211:116370116370116873504Neisseria meningitidis 8013, complete genomepeptide deformylase (PDF; polypeptide deformylase)1e-1272.8
NC_017505:96293:116667116667117170504Neisseria meningitidis alpha710 chromosome, complete genomepolypeptide deformylase1e-1272.8
NC_017515:76861:124063124063124566504Neisseria meningitidis M04-240196 chromosome, complete genomepeptide deformylase1e-1272.8
NC_017516:96879:118089118089118592504Neisseria meningitidis H44/76 chromosome, complete genomepeptide deformylase1e-1272.8
NC_017517:98554:119526119526120029504Neisseria meningitidis M01-240355 chromosome, complete genomepeptide deformylase1e-1272.8
NC_017518:98639:119014119014119517504Neisseria meningitidis NZ-05/33 chromosome, complete genomepeptide deformylase1e-1272.8
NC_017095:1333810:134101513410151341515501Fervidobacterium pennivorans DSM 9078 chromosome, complete genomepeptide deformylase2e-1272
NC_017511:1883663:190423819042381904783546Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomepeptide deformylase3e-1271.2
NC_011035:1974489:199596819959681996513546Neisseria gonorrhoeae NCCP11945 chromosome, complete genomepeptide deformylase3e-1271.2
NC_019897:73957:124573124573125091519Thermobacillus composti KWC4 chromosome, complete genomepeptide deformylase6e-1270.1
NC_015953:4908069:493009249300924930730639Streptomyces sp. SirexAA-E chromosome, complete genomepeptide deformylase1e-1169.3
NC_007517:3751107:375343537534353753938504Geobacter metallireducens GS-15, complete genomeFormylmethionine deformylase3e-1167.8
NC_015425:906969:921878921878922357480Clostridium botulinum BKT015925 chromosome, complete genomepeptide deformylase4e-1167.4
NC_006511:3364448:338332333833233383832510Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpeptide deformylase5e-1167
NC_004842:1081271:110137011013701101927558Anaplasma marginale str. St. Maries, complete genomeN-formylmethionylaminoacyl-tRNA deformylase1e-1065.9
NC_009718:1024000:104289810428981043410513Fervidobacterium nodosum Rt17-B1, complete genomepeptide deformylase2e-1065.5
NC_006142:243899:254055254055254582528Rickettsia typhi str. Wilmington, complete genomepeptide deformylase2e-1065.5
NC_017062:244330:254486254486255013528Rickettsia typhi str. B9991CWPP chromosome, complete genomepeptide deformylase2e-1065.5
NC_017066:243913:254069254069254596528Rickettsia typhi str. TH1527 chromosome, complete genomepeptide deformylase2e-1065.5
NC_002695:4153394:416870241687024169211510Escherichia coli O157:H7 str. Sakai, complete genomepeptide deformylase1e-1065.5
CP002185:3627992:364665936466593647168510Escherichia coli W, complete genomepeptide deformylase1e-1065.5
NC_011833:545713:546430546430546951522Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,peptide deformylase2e-1065.1
NC_009879:260000:266962266962267489528Rickettsia canadensis str. McKiel, complete genomepeptide deformylase3e-1064.7
NC_016929:258500:266645266645267172528Rickettsia canadensis str. CA410 chromosome, complete genomepeptide deformylase3e-1064.7
NC_004061:540354:545791545791546294504Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomepolypeptide deformylase2e-1064.7
NC_013282:3962188:397851939785193979052534Cronobacter turicensis, complete genomePeptide deformylase4e-1064.3
NC_013132:6385223:639321763932176393792576Chitinophaga pinensis DSM 2588, complete genomepeptide deformylase4e-1063.9
NC_004461:779000:781464781464782015552Staphylococcus epidermidis ATCC 12228, complete genomepeptide deformylase8e-1063.2
NC_014655:851381:856124856124856705582Leadbetterella byssophila DSM 17132 chromosome, complete genomepeptide deformylase1e-0962.4
NC_017256:545204:545917545917546432516Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,peptide deformylase2e-0962
NC_008025:2407618:241301524130152413665651Deinococcus geothermalis DSM 11300, complete genomePeptide deformylase2e-0962
NC_014314:576465:608919608919609443525Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completepeptide deformylase2e-0961.6
NC_005061:214168:236304236304236831528Candidatus Blochmannia floridanus, complete genomepolypeptide deformylase4e-0960.8
NC_014109:393500:416454416454416909456Candidatus Riesia pediculicola USDA chromosome, complete genomepeptide deformylase4e-0960.5
NC_004545:499709:513039513039513521483Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomepolypeptide deformylase5e-0960.5
NC_008261:2117207:212122021212202121687468Clostridium perfringens ATCC 13124, complete genomepolypeptide deformylase7e-0960.1
NC_003366:1901898:190591019059101906377468Clostridium perfringens str. 13, complete genomepolypeptide deformylase7e-0960.1
NC_016789:1334514:135447213544721354981510Corynebacterium diphtheriae PW8 chromosome, complete genomepeptide deformylase6e-0960.1
NC_008593:841291:856270856270856746477Clostridium novyi NT, complete genomepeptide deformylase6e-0960.1
NC_016783:1313008:133296413329641333473510Corynebacterium diphtheriae INCA 402 chromosome, complete genomepeptide deformylase8e-0959.7
NC_002935:1315019:133497513349751335484510Corynebacterium diphtheriae NCTC 13129, complete genomepeptide deformylase8e-0959.7
NC_014655:2533929:253730625373062537962657Leadbetterella byssophila DSM 17132 chromosome, complete genomepeptide deformylase1e-0859.3
NC_016787:1276983:129808412980841298593510Corynebacterium diphtheriae HC03 chromosome, complete genomepeptide deformylase2e-0858.5
NC_016790:1259356:127546312754631275972510Corynebacterium diphtheriae VA01 chromosome, complete genomepeptide deformylase2e-0858.5
NC_016799:1343020:136412013641201364629510Corynebacterium diphtheriae 31A chromosome, complete genomepeptide deformylase2e-0858.5
NC_014371:177536:182944182944183504561Prevotella melaninogenica ATCC 25845 chromosome chromosome II,peptide deformylase2e-0858.2
NC_013204:929434:950025950025950435411Eggerthella lenta DSM 2243, complete genomeformylmethionine deformylase3e-0858.2
NC_010520:2807429:283291628329162833452537Clostridium botulinum A3 str. Loch Maree, complete genomepeptide deformylase5e-0857
NC_009697:2680607:268476226847622685298537Clostridium botulinum A str. ATCC 19397 chromosome, completepeptide deformylase9e-0856.2
NC_008820:1659612:166494716649471665492546Prochlorococcus marinus str. MIT 9303, complete genomeFormylmethionine deformylase1e-0755.8
NC_012563:2979147:298582129858212986357537Clostridium botulinum A2 str. Kyoto, complete genomepeptide deformylase1e-0755.5
NC_013440:8443451:845437984543798454894516Haliangium ochraceum DSM 14365, complete genomeformylmethionine deformylase5e-0753.9
NC_008513:343540:354044354044354493450Buchnera aphidicola str. Cc (Cinara cedri), complete genomeDef3e-0651.2
NC_015434:3581001:359845235984523598949498Verrucosispora maris AB-18-032 chromosome, complete genomepeptide deformylase3e-0651.2
NC_007947:1556437:157481815748181575351534Methylobacillus flagellatus KT, complete genomePeptide deformylase3e-0651.2
NC_014391:3596812:361503836150383615541504Micromonospora aurantiaca ATCC 27029 chromosome, complete genomepeptide deformylase4e-0650.8
NC_014815:5603000:560875356087535609256504Micromonospora sp. L5 chromosome, complete genomepeptide deformylase4e-0650.8