Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1662142 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1662142, End: 1663575, Length: 1434

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017271:2789667:2791578279157827928551278Xanthomonas campestris pv. raphani 756C chromosome, completecarbohydrate-selective porin OprB3e-0757
NC_015137:868944:8805398805398820921554Burkholderia sp. CCGE1001 chromosome 2, complete sequencecarbohydrate-selective porin OprB7e-68258
NC_007508:3034718:3036632303663230379091278Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecarbohydrate-selective porin OprB2e-0654.7
NC_008343:2589680:2603378260337826048231446Granulibacter bethesdensis CGDNIH1, complete genomeporin9e-1685.1
NC_017146:2383509:2400411240041124020571647Acetobacter pasteurianus IFO 3283-26, complete genomeporin B carbohydrate-selective OprB1e-1688.2
NC_017108:2383370:2397726239772623993721647Acetobacter pasteurianus IFO 3283-12, complete genomeporin B carbohydrate-selective OprB1e-1688.2
NC_017150:2290681:2306928230692823085741647Acetobacter pasteurianus IFO 3283-01-42C, complete genomeporin B carbohydrate-selective OprB1e-1688.2
NC_017111:2383388:2397744239774423993901647Acetobacter pasteurianus IFO 3283-32, complete genomeporin B carbohydrate-selective OprB1e-1688.2
NC_017121:2383375:2397731239773123993771647Acetobacter pasteurianus IFO 3283-07, complete genomeporin B carbohydrate-selective OprB1e-1688.2
NC_013209:2384826:2399182239918224008281647Acetobacter pasteurianus IFO 3283-01, complete genomeporin B carbohydrate-selective OprB1e-1688.2
NC_017125:2383467:2400369240036924020151647Acetobacter pasteurianus IFO 3283-22, complete genomeporin B carbohydrate-selective OprB1e-1688.2
NC_017100:2383487:2400389240038924020351647Acetobacter pasteurianus IFO 3283-03, complete genomeporin B carbohydrate-selective OprB1e-1688.2