Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1658577 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1658577, End: 1659356, Length: 780

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:3885490:388549038854903886362873Methylobacterium nodulans ORS 2060, complete genomecobalamin 5'-phosphate synthase2e-27122
NC_012969:142000:161076161076161837762Methylovorus glucosetrophus SIP3-4 chromosome, complete genomecobalamin 5'-phosphate synthase6e-21101
NC_011149:2040396:205624120562412056963723Salmonella enterica subsp. enterica serovar Agona str. SL483,cobalamin 5'-phosphate synthase2e-2099.4
NC_004631:948054:948054948054948797744Salmonella enterica subsp. enterica serovar Typhi Ty2, completecobalamin synthase3e-2098.6
NC_016832:948029:948029948029948751723Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cobalamin synthase3e-2098.6
NC_011094:2061000:207792920779292078672744Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalamin synthase4e-2098.2
NC_013353:2455052:245956624595662460309744Escherichia coli O103:H2 str. 12009, complete genomecobalamin 5'-phosphate synthase8e-2097.4
AP010958:2455052:245956624595662460309744Escherichia coli O103:H2 str. 12009 DNA, complete genomecobalamin 5'-phosphate synthase8e-2097.4
NC_011601:2139188:217951421795142180257744Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomecobalamin synthase2e-1995.9
NC_009800:2083465:210308121030812103824744Escherichia coli HS, complete genomecobalamin 5'-phosphate synthase3e-1995.5
NC_016822:2201388:224259522425952243338744Shigella sonnei 53G, complete genomecobalamin synthase3e-1995.5
CP002797:2062006:206546920654692066212744Escherichia coli NA114, complete genomeCobalamin synthase5e-1994.7
NC_008253:2056734:207184420718442072587744Escherichia coli 536, complete genomecobalamin [5'-phosphate] synthase5e-1994.7
NC_004431:2304280:231936723193672320146780Escherichia coli CFT073, complete genomecobalamin synthase7e-1994.4
NC_007946:2155454:217053221705322171311780Escherichia coli UTI89, complete genomecobalamin 5'-phosphate synthase / cobalamin synthase7e-1994.4
NC_007951:1042291:106407510640751064851777Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative cobalamin-5-phosphate synthase8e-1994.4
AC_000091:2027648:206661620666162067359744Escherichia coli W3110 DNA, complete genomecobalamin 5'-phosphate synthase1e-1894
NC_010473:2119480:215351121535112154254744Escherichia coli str. K-12 substr. DH10B, complete genomecobalamin 5'-phosphate synthase1e-1894
NC_000913:2042935:206250320625032063246744Escherichia coli K12, complete genomecobalamin synthase1e-1894
NC_011745:2209288:227152022715202272263744Escherichia coli ED1a chromosome, complete genomecobalamin synthase1e-1894
NC_012759:1920955:195498619549861955729744Escherichia coli BW2952 chromosome, complete genomecobalamin synthase1e-1894
NC_012947:1769438:176943817694381770181744Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecobalamin synthase8e-1994
NC_012967:1967675:200247920024792003222744Escherichia coli B str. REL606 chromosome, complete genomecobalamin synthase8e-1994
NC_016148:141011:156052156052156792741Thermovirga lienii DSM 17291 chromosome, complete genomecobalamin 5'-phosphate synthase3e-1892
NC_013854:2714033:273312227331222733970849Azospirillum sp. B510, complete genomecobalamin synthase4e-1788.6
NC_010468:1816359:181690118169011817644744Escherichia coli ATCC 8739, complete genomecobalamin 5'-phosphate synthase5e-1788.2
NC_007643:791500:791573791573792358786Rhodospirillum rubrum ATCC 11170, complete genomeCobalamin-5-phosphate synthase CobS1e-1687
NC_010506:4951500:495452049545204955293774Shewanella woodyi ATCC 51908, complete genomecobalamin 5'-phosphate synthase7e-1684.3
NC_015565:624298:642658642658643407750Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecobalamin synthase1e-1583.6
NC_015497:3794000:381461038146103815419810Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecobalamin 5'-phosphate synthase4e-1581.6
NC_007481:3167434:318663331866333187457825Pseudoalteromonas haloplanktis TAC125 chromosome I, completecobalamin 5'-phosphate synthase5e-1581.6
NC_013892:853366:853366853366854124759Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalamin 5'-phosphate synthase1e-1480.1
NC_014632:567289:578648578648579397750Ilyobacter polytropus DSM 2926 chromosome, complete genomecobalamin-5'-phosphate synthase6e-1478.2
NC_008321:977500:998408998408999196789Shewanella sp. MR-4, complete genomecobalamin 5'-phosphate synthase4e-1375.5
NC_014622:1514416:152548615254861526355870Paenibacillus polymyxa SC2 chromosome, complete genomecobalamin synthase4e-1375.5
NC_017068:1327025:132803813280381328793756Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative cobalamin 5'-phosphate synthase4e-1375.1
NC_016641:3173250:318504931850493185915867Paenibacillus terrae HPL-003 chromosome, complete genomecobalamin synthase9e-1373.9
NC_021171:415771:435245435245435985741Bacillus sp. 1NLA3E, complete genomecobalamin (5'-phosphate) synthase4e-1272
NC_012962:1827000:184286118428611843607747Photorhabdus asymbiotica, complete genomecobalamin synthase6e-1271.2
NC_015437:1038476:104171310417131042540828Selenomonas sputigena ATCC 35185 chromosome, complete genomeCobalamin synthase9e-1270.9
NC_010162:9641549:964154996415499642316768Sorangium cellulosum 'So ce 56', complete genomecobalamin synthase2e-1170.1
NC_014483:1376500:138773413877341388603870Paenibacillus polymyxa E681 chromosome, complete genomeCobalamin synthase3e-1169.3
NC_012488:1159463:116075811607581161504747Listeria monocytogenes Clip81459, complete genomecobalamin (5'-phosphatase) synthetase4e-1168.6
NC_013766:1202713:120271312027131203459747Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein7e-1167.8
NC_009253:2927802:293128329312832932032750Desulfotomaculum reducens MI-1 chromosome, complete genomecobalamin 5'-phosphate synthase8e-1167.4
NC_016751:1700164:171404017140401714780741Marinitoga piezophila KA3 chromosome, complete genomecobalamin 5''-phosphate synthase/cobalamin synthase1e-1067
NC_016776:2913966:291916229191622919905744Bacteroides fragilis 638R, complete genomeputative cobalamin 5'-phosphate synthase3e-1065.9
NC_003228:2929006:293420229342022934945744Bacteroides fragilis NCTC 9343, complete genomeputative cobalamin 5'-phosphate synthase3e-1065.9
NC_015663:4950000:495002249500224950762741Enterobacter aerogenes KCTC 2190 chromosome, complete genomecobalamin synthase5e-1065.1
NC_009718:1470972:147807814780781478803726Fervidobacterium nodosum Rt17-B1, complete genomecobalamin-5-phosphate synthase CobS6e-1064.7
NC_005126:3485330:348739834873983488144747Photorhabdus luminescens subsp. laumondii TTO1, complete genomecobalamin synthase6e-1064.7
NC_019673:1656680:166097216609721661685714Saccharothrix espanaensis DSM 44229 complete genomeCobalamin 5'-phosphate synthase7e-1064.3
NC_009831:4539952:454054845405484541321774Shewanella sediminis HAW-EB3, complete genomecobalamin 5'-phosphate synthase8e-1064.3
NC_010475:2896000:290443329044332905221789Synechococcus sp. PCC 7002, complete genomecobalamin synthase2e-0962.8
NC_011296:1151346:115281211528121153594783Thermodesulfovibrio yellowstonii DSM 11347, complete genomecobalamin 5'-phosphate synthase2e-0962.8
NC_013517:1055854:108700010870001087728729Sebaldella termitidis ATCC 33386, complete genomecobalamin 5'-phosphate synthase3e-0859.3
NC_012491:1263469:126851212685121269252741Brevibacillus brevis NBRC 100599, complete genomecobalamin (5'-phosphate) synthase3e-0858.9
NC_020291:1593143:160448316044831605238756Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecobalamin synthase CobS3e-0755.8
NC_003030:1510000:152632615263261527084759Clostridium acetobutylicum ATCC 824, complete genomecobalamin synthase5e-0755.1
NC_015687:1508664:152792715279271528685759Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobalamin synthase5e-0755.1
NC_017295:1507956:152574015257401526498759Clostridium acetobutylicum EA 2018 chromosome, complete genomecobalamin synthase5e-0755.1
NC_014844:762794:763861763861764598738Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomecobalamin-5-phosphate synthase CobS2e-0652.8
NC_006085:481231:487055487055487942888Propionibacterium acnes KPA171202, complete genomeputative cobalamin-5-phosphate synthase, CobS4e-0652
NC_014039:499233:505099505099505944846Propionibacterium acnes SK137 chromosome, complete genomecobalamin-5-phosphate synthase4e-0652
NC_016511:472666:478541478541479380840Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecobalamin-5-phosphate synthase, CobS4e-0652
NC_016516:463460:469338469338470177840Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecobalamin-5-phosphate synthase, CobS4e-0652