Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1657659 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1657659, End: 1658366, Length: 708

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:2618951:264884026488402649649810Methylobacterium nodulans ORS 2060, complete genomeaspartyl protease-like protein2e-1582.4
NC_007298:3271071:327107132710713271721651Dechloromonas aromatica RCB, complete genomeConserved hypothetical protein 2281, catalytic3e-1272
NC_009719:1135523:115950611595061160201696Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein6e-1994.4
NC_004578:5623783:562604956260495626582534Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein7e-1167.4
NC_015675:4565500:458353745835374584241705Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein4e-37154
NC_009667:1371924:139104813910481391572525Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencehypothetical protein1e-1170.1