Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1647964 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1647964, End: 1649505, Length: 1542

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010172:4064087:4088925408892540916752751Methylobacterium extorquens PA1, complete genomeLipopolysaccharide biosynthesis protein-like protein8e-33142
NC_018678:3953809:3965728396572839685052778Alteromonas macleodii str. 'English Channel 673' chromosome,family 2 glycosyl transferase1e-25118
NC_014364:667841:6998186998187052445427Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeRhamnan synthesis F2e-25117
NC_007513:632884:6421336421336456183486Synechococcus sp. CC9902, complete genomeLipopolysaccharide biosynthesis protein-like2e-20100
NC_005773:1135374:1155816115581611596043789Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein1e-1895.1
NC_011894:4360577:4378132437813243822324101Methylobacterium nodulans ORS 2060, complete genomeLipopolysaccharide biosynthesis protein-like protein1e-1895.1
NC_007516:1847745:1854383185438318578713489Synechococcus sp. CC9605, complete genomeLipopolysaccharide biosynthesis protein-like2e-1894
NC_002678:6232000:6241568624156862435021935Mesorhizobium loti MAFF303099, complete genomehypothetical protein6e-1892.8
NC_014100:449541:4495414495414519972457Caulobacter segnis ATCC 21756 chromosome, complete genomerhamnan synthesis protein F2e-1791.3
NC_015942:3147514:3161290316129031640222733Acidithiobacillus ferrivorans SS3 chromosome, complete genomeRhamnan synthesis F2e-1790.9
NC_016147:307275:3215803215803232111632Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein7e-1789.4
NC_013235:4618908:4634361463436146362561896Nakamurella multipartita DSM 44233, complete genomeRhamnan synthesis F2e-1687.8
NC_014364:667841:6964946964946997963303Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeglycosyl transferase family 24e-1686.7
NC_015554:4266530:4286876428687642887921917Alteromonas sp. SN2 chromosome, complete genomehypothetical protein5e-1686.3
NC_007513:632884:6535336535336550921560Synechococcus sp. CC9902, complete genomeLipopolysaccharide biosynthesis protein-like1e-1585.1
NC_002678:6232000:6243553624355362454661914Mesorhizobium loti MAFF303099, complete genomehypothetical protein4e-1583.2
NC_016147:307275:3235063235063252811776Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein9e-1582
NC_015850:1497998:1509559150955915129903432Acidithiobacillus caldus SM-1 chromosome, complete genomeglycosyltransferase2e-1480.9
NC_017267:3982619:4000896400089640025931698Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeputative glycosyltransferase7e-1479.3
NC_013416:1621469:1633406163340616353041899Aggregatibacter actinomycetemcomitans D11S-1, complete genomelipopolysaccharide biosynthesis protein1e-1378.6
NC_019907:773944:777777777777778622846Liberibacter crescens BT-1 chromosome, complete genomehypothetical protein2e-1274.3
NC_020304:2237194:2253114225311422572774164Desulfocapsa sulfexigens DSM 10523, complete genomemethyltransferase, FkbM family3e-1273.9
NC_014656:1829336:1845667184566718475921926Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein3e-1273.6
NC_010995:4117963:4126525412652541291432619Cellvibrio japonicus Ueda107, complete genomeCapsule polysaccharide biosynthesis protein family5e-1273.2
NC_009379:304222:3125753125753158233249Polynucleobacter sp. QLW-P1DMWA-1, complete genomeMethyltransferase type 118e-1272.4
NC_011757:5102732:5131041513104151380697029Methylobacterium chloromethanicum CM4, complete genomeAnimal heme peroxidase1e-1172
NC_011757:97281:97281972811043097029Methylobacterium chloromethanicum CM4, complete genomeAnimal heme peroxidase1e-1171.6
NC_010505:1264758:1264758126475812687263969Methylobacterium radiotolerans JCM 2831, complete genomeglycosyl transferase family 25e-1169.7
NC_014638:56500:7476574765766601896Bifidobacterium bifidum PRL2010 chromosome, complete genomelipopolysaccharide biosynthesis protein6e-1169.3
NC_014656:1829336:1847656184765618496111956Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein8e-1168.9
NC_009256:3540531:3556562355656235602573696Burkholderia vietnamiensis G4 chromosome 1, complete sequencelipopolysaccharide biosynthesis protein-like protein1e-1068.6
NC_005071:87907:9452294522967382217Prochlorococcus marinus str. MIT 9313, complete genomeglycosyltransferase2e-0964.7
NC_006677:215466:2181472181472219293783Gluconobacter oxydans 621H, complete genomehypothetical protein2e-0963.9
NC_014624:3561756:3577696357769635795791884Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-0963.9
NC_015052:2181514:2196412219641221984302019Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein2e-0860.8
NC_010816:1852406:1871437187143718734372001Bifidobacterium longum DJO10A, complete genomeLipopolysaccharide biosynthesis protein2e-0860.8
NC_011989:1638261:1652280165228016543162037Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein2e-0861.2
NC_010172:5036385:505234850523485052761414Methylobacterium extorquens PA1, complete genomehypothetical protein1e-0758.9
NC_012988:5516872:553879955387995539221423Methylobacterium extorquens DM4, complete genomehypothetical protein1e-0758.5
NC_012988:1162838:1176037117603711792133177Methylobacterium extorquens DM4, complete genomealkaline phosphatase1e-0758.2
NC_002678:6232000:6245804624580462476331830Mesorhizobium loti MAFF303099, complete genomehypothetical protein4e-0756.6
NC_013446:3147202:3161047316104731625191473Comamonas testosteroni CNB-2, complete genomeputative DMSO reductase5e-0756.2
NC_007645:2294553:2302985230298523072324248Hahella chejuensis KCTC 2396, complete genomeGlycosyltransferase involved in cell wall biogenesis5e-0756.2
NC_017150:255474:259156259156259635480Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein2e-0654.3
NC_017986:1155811:1166781116678111714454665Pseudomonas putida ND6 chromosome, complete genomegroup 1 glycosyl transferase3e-0653.5
NC_017150:255474:2618942618942634441551Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein5e-0653.1