Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1647482 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1647482, End: 1647868, Length: 387

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017325:1488841:149109914910991491464366Sinorhizobium meliloti SM11 chromosome, complete genomehypothetical protein4e-1166.6
NC_015590:298063:302790302790303155366Sinorhizobium meliloti AK83 chromosome 1, complete sequencehypothetical protein7e-1165.9
NC_017325:1897500:189975118997511900116366Sinorhizobium meliloti SM11 chromosome, complete genomehypothetical membrane-anchored protein1e-1065.5
NC_017323:689512:692560692560692925366Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequencehypothetical protein2e-0960.8
NC_012587:1203103:120605012060501206442393Rhizobium sp. NGR234, complete genomehypothetical protein2e-0960.8