Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1646008 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1646008, End: 1646625, Length: 618

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003919:3060484:3074406307440630757011296Xanthomonas axonopodis pv. citri str. 306, complete genomecarboxypeptidase3e-1685.1
NC_019940:389979:407102407102407845744Thioflavicoccus mobilis 8321 chromosome, complete genomechitinase7e-1993.6
NC_008390:2448379:2456231245623124592002970Burkholderia cepacia AMMD chromosome 1, complete sequenceEF hand domain protein8e-1890.1
NC_009524:1488714:150499415049941505677684Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein2e-21102
NC_008319:2335801:233892223389222339572651Synechococcus sp. CC9311, complete genomehypothetical protein9e-25113
NC_013971:3117000:312506031250603125347288Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-0755.8
NC_011985:1831961:183386618338661834426561Agrobacterium radiobacter K84 chromosome 1, complete genomehypothetical protein3e-25115
NC_012526:2317862:2324790232479023265891800Deinococcus deserti VCD115, complete genomeputative amidase2e-0859.3
NC_010688:1908012:1949480194948019507751296Xanthomonas campestris pv. campestris, complete genomeputative carboxpeptidase2e-1685.9
NC_016835:1:5143514377942652Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,putative chitinase6e-1787.4