Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1645680 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1645680, End: 1645931, Length: 252

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013194:4964000:497195249719524972218267Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeplasmid stabilization system2e-1271.2
NC_015731:2460248:247578624757862476052267Nitrosomonas sp. Is79A3 chromosome, complete genomeplasmid stabilization system8e-1165.9
NC_012724:1308000:131440013144001314657258Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein6e-1062.8
NC_007498:2087811:208910920891092089318210Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein2e-0961.2
NC_019977:1456366:145799514579951458258264Methanomethylovorans hollandica DSM 15978, complete genomecytotoxic translational repressor of toxin-antitoxin stability system2e-0857.4
NC_021184:3912805:392187839218783922165288Desulfotomaculum gibsoniae DSM 7213, complete genomeaddiction module toxin, RelE/StbE family1e-0652.4