Pre_GI: BLASTP Hits

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Query: NC_011989:1604939:1619678 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1619678, End: 1620334, Length: 657

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014220:2265882:227608922760892276676588Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeNusG antitermination factor2e-1066.2
NC_012587:1203103:122498612249861225516531Rhizobium sp. NGR234, complete genomepossible transcription antitermination protein NusG3e-0962
NC_015259:1803266:182377918237791824309531Polymorphum gilvum SL003B-26A1 chromosome, complete genomeNusG antitermination factor3e-0962
NC_020301:669000:677902677902678432531Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genometranscriptional antiterminator NusG5e-0961.2
NC_020299:764526:800397800397800933537Candidatus Kinetoplastibacterium oncopeltii TCC290E, completetranscriptional antiterminator NusG1e-0859.7
NC_005955:841781:853257853257853787531Bartonella quintana str. Toulouse, complete genometranscription antitermination protein NusG3e-0858.9
NC_002927:5327094:852685269059534Bordetella bronchiseptica RB50, complete genometranscription antitermination protein NusG1e-0756.6
NC_012846:825341:830531830531831061531Bartonella grahamii as4aup, complete genometranscription antitermination protein NusG1e-0756.6
NC_010645:3720501:771977198252534Bordetella avium 197N, complete genometranscription antitermination protein NusG2e-0756.2
NC_007716:467235:485785485785486384600Aster yellows witches'-broom phytoplasma AYWB, complete genometranscription antitermination protein nusG2e-0756.2
NC_007626:3393940:339647833964783397011534Magnetospirillum magneticum AMB-1, complete genomeTranscription antiterminator2e-0755.8
NC_014932:985882:100024810002481000796549Bartonella clarridgeiae 73, complete genometranscription antitermination protein3e-0755.5
NC_015458:3077804:307830330783033078836534Pusillimonas sp. T7-7 chromosome, complete genometranscription antitermination protein NusG3e-0755.5
NC_005303:272915:290859290859291473615Onion yellows phytoplasma OY-M, complete genometranscription antiterminator5e-0754.7
NC_005956:699206:706265706265706795531Bartonella henselae str. Houston-1, complete genometranscription antitermination protein NusG6e-0754.3
NC_019814:125611:161160161160161696537Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonastranscriptional antiterminator NusG6e-0754.3
NC_016026:997225:100262410026241003127504Micavibrio aeruginosavorus ARL-13 chromosome, complete genometranscription termination factor nusG family protein7e-0754.3
NC_007759:291368:299664299664300194531Syntrophus aciditrophicus SB, complete genometranscription antitermination protein2e-0652.8
NC_010520:3788702:382327038232703823794525Clostridium botulinum A3 str. Loch Maree, complete genometranscription termination/antitermination factor NusG3e-0652.4
NC_012563:3956500:399059839905983991122525Clostridium botulinum A2 str. Kyoto, complete genometranscription termination/antitermination factor NusG3e-0652.4
NC_010516:3759136:379366937936693794193525Clostridium botulinum B1 str. Okra, complete genometranscription termination/antitermination factor NusG3e-0652.4
NC_009495:3688138:372267237226723723196525Clostridium botulinum A str. ATCC 3502 chromosome, complete genometranscription antitermination protein NusG3e-0652.4
NC_009698:3553365:359577035957703596294525Clostridium botulinum A str. Hall chromosome, complete genometranscription antitermination protein NusG3e-0652.4
NC_016609:8271000:827128182712818271790510Niastella koreensis GR20-10 chromosome, complete genomeNusG antitermination factor4e-0651.6
NC_009617:163466:176373176373176918546Clostridium beijerinckii NCIMB 8052 chromosome, complete genometranscription antitermination protein NusG7e-0650.8
NC_010002:528529:536220536220536804585Delftia acidovorans SPH-1, complete genomeNusG antitermination factor7e-0650.8