Pre_GI: BLASTP Hits

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Query: NC_011989:1604939:1612077 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1612077, End: 1613108, Length: 1032

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008687:965152:9824629824629835351074Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage integrase family protein2e-60233
NC_007493:546000:559600559600560490891Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePossible integrase/recombinase5e-44178
NC_009952:997950:1007057100705710081691113Dinoroseobacter shibae DFL 12, complete genomeintegrase family protein6e-39161
NC_007761:3047321:3051864305186430530781215Rhizobium etli CFN 42, complete genomeprobable integrase/recombinase protein1e-31137
NC_011757:5048714:5048714504871450499311218Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein1e-28127
NC_007964:328825:3569203569203580891170Nitrobacter hamburgensis X14, complete genomephage integrase6e-23108
NC_014774:1210004:125682512568251257724900Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeintegrase family protein5e-23108
NC_014664:3003633:3019218301921830202761059Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeintegrase family protein2e-22107
NC_016642:471656:4729034729034739491047Pseudovibrio sp. FO-BEG1 chromosome, complete genomephage integrase family1e-21104
NC_010511:915313:9227029227029238591158Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein6e-21101
NC_012985:1:8544854495901047Candidatus Liberibacter asiaticus str. psy62, complete genomephage-related integrase/recombinase9e-21101
NC_009049:627000:6368326368326380011170Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencephage integrase family protein3e-2099.4
NC_011894:7421867:7440986744098674420201035Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein4e-1892.4
NC_009428:833701:842178842178843062885Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomephage integrase family protein3e-1789.7
NC_009428:833701:8478178478178489051089Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomephage integrase family protein8e-1684.7
NC_010511:4313769:4325412432541243264611050Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein4e-1479.3
NC_014034:2253649:2253649225364922547191071Rhodobacter capsulatus SB1003 chromosome, complete genomephage integrase1e-0964.7
NC_007494:714525:7351117351117362321122Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative integrase2e-0963.9
NC_008686:2417000:242338424233842424307924Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein5e-0858.9
NC_010793:1628500:1631109163110916323081200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-0757.8
NC_010793:1695716:1709642170964217108411200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-0757.8
NC_008609:3921113:3938275393827539394831209Pelobacter propionicus DSM 2379, complete genomephage integrase family protein2e-0757.4
NC_009485:7021228:7029039702903970301871149Bradyrhizobium sp. BTAi1 chromosome, complete genomephage integrase2e-0757
NC_010793:1723365:1726048172604817272471200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase2e-0756.6
NC_015164:2859000:2875572287557228767951224Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegrase family protein6e-0755.5