Pre_GI: BLASTP Hits

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Query: NC_011989:1604939:1611291 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1611291, End: 1612052, Length: 762

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010505:1264758:126880912688091269603795Methylobacterium radiotolerans JCM 2831, complete genomeABC-2 type transporter6e-32137
NC_011757:4030346:405555940555594056362804Methylobacterium chloromethanicum CM4, complete genomeABC-2 type transporter1e-27123
NC_010725:2589014:259395025939502594744795Methylobacterium populi BJ001, complete genomeABC-2 type transporter2e-27122
NC_011666:3001513:301303930130393013845807Methylocella silvestris BL2, complete genomeABC-2 type transporter2e-25115
NC_015596:1511961:152481715248171525593777Sinorhizobium meliloti AK83 chromosome 2, complete sequenceABC transporter5e-2098.2
NC_018000:3009864:301599630159963016772777Sinorhizobium fredii USDA 257 chromosome, complete genomepolysialic acid transport protein KpsM5e-1994.7
NC_009620:1504933:152076315207631521545783Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceABC-2 type transporter2e-1893.2
NC_012586:922095:935872935872936648777Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceRkpT2, cell surface polysaccharide export ABC-2 transporter1e-1790.5
NC_017323:689512:704545704545705321777Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceABC transporter1e-1790.1
NC_016815:1543308:1558994155899415600371044Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceCapsule polysaccharide export inner-membrane protein ctrC3e-1788.6
NC_015696:758153:769775769775770632858Francisella sp. TX077308 chromosome, complete genomepolysialic acid transport protein KpsM5e-1684.7
NC_012967:3012317:302768530276853028461777Escherichia coli B str. REL606 chromosome, complete genomePolysialic acid transport protein kpsM1e-1583.6
NC_009620:1504933:150881115088111509581771Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceABC-2 type transporter1e-1583.6
NC_011751:3530954:355054535505453551381837Escherichia coli UMN026 chromosome, complete genomepolysialic acid transport protein2e-1583.2
NC_010336:1248071:125897912589791259773795Francisella philomiragia subsp. philomiragia ATCC 25017, completepolysialic acid transport protein KpsM2e-1582.8
NC_004431:3513147:352851635285163529292777Escherichia coli CFT073, complete genomeKpsM protein2e-1582.4
NC_014618:586240:595117595117595893777Enterobacter cloacae SCF1 chromosome, complete genomeABC transporter4e-1581.6
NC_011745:3511600:352480235248023525638837Escherichia coli ED1a chromosome, complete genomePolysialic acid transport protein5e-1581.6
NC_012586:922095:944307944307945077771Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceRkpT1, cell surface polysaccharide export ABC-2 transporter6e-1581.3
NC_018000:3009864:302861630286163029386771Sinorhizobium fredii USDA 257 chromosome, complete genomepolysialic acid transport protein KpsM7e-1580.9
NC_015596:1511961:151653315165331517303771Sinorhizobium meliloti AK83 chromosome 2, complete sequenceABC transporter4e-1478.6
NC_011750:3584000:359843735984373599273837Escherichia coli IAI39 chromosome, complete genomepolysialic acid transport protein9e-1477.4
NC_011742:3277941:329210732921073292943837Escherichia coli S88 chromosome, complete genomePolysialic acid transport protein9e-1477.4
NC_007946:3289151:330440833044083305184777Escherichia coli UTI89, complete genomepolysialic acid transport protein KpsM9e-1477.4
NC_008563:3362058:337731533773153378091777Escherichia coli APEC O1, complete genomepolysialic acid transport protein KpsM9e-1477.4
NC_010498:3291344:330699033069903307766777Escherichia coli SMS-3-5, complete genomepolysialic acid capsule biosynthesis transport protein KpsM9e-1477.4
NC_014618:4010689:402792940279294028705777Enterobacter cloacae SCF1 chromosome, complete genomeABC transporter2e-1376.3
NC_008253:3161311:319554131955413196317777Escherichia coli 536, complete genomepolysialic acid transport protein KpsM9e-1373.9
NC_013446:3147202:316967831696783170424747Comamonas testosteroni CNB-2, complete genomeABC-2 type transporter1e-1273.6
NC_013282:646569:651829651829652635807Cronobacter turicensis, complete genomePolysialic acid transport protein kpsM7e-1271.2
NC_017047:1434500:144774914477491448525777Rahnella aquatilis HX2 chromosome, complete genomeABC transporter7e-1271.2
NC_015061:1481500:149479714947971495573777Rahnella sp. Y9602 chromosome, complete genomeABC transporter7e-1271.2
NC_010804:671081:684002684002684817816Burkholderia multivorans ATCC 17616 chromosome 1, completeABC-2 type transport system permease protein7e-1270.9
NC_011901:1398376:140228414022841403063780Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeABC 2 transporter integral membrane protein6e-1167.8
NC_009778:3287693:329944232994423300218777Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1066.2
NC_020260:3277007:329053632905363291312777Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-1066.2
NC_010170:2374852:238614523861452386930786Bordetella petrii, complete genomepermease component of an ABC exporter involved in polysaccharide export5e-1064.7
NC_008751:2988235:301210630121063012942837Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeABC-2 type transporter1e-0963.5
NC_015381:766355:788413788413789204792Burkholderia gladioli BSR3 chromosome 1, complete sequenceCtrC protein6e-0961.2
NC_014541:475350:496668496668497474807Ferrimonas balearica DSM 9799 chromosome, complete genomeABC-2 type transporter8e-0857.4
NC_005070:617448:622199622199623020822Synechococcus sp. WH 8102, complete genomepossible ABC transporter involved in polysaccharide efflux1e-0757
NC_009430:16500:223392233923136798Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, completehypothetical protein3e-0755.8
NC_010084:2822295:283995628399562840564609Burkholderia multivorans ATCC 17616 chromosome 1, completeABC-2 type transporter3e-0755.8
NC_009076:3179662:320309732030973203879783Burkholderia pseudomallei 1106a chromosome I, complete sequencecapsular polysaccharide export inner-membrane protein3e-0755.5
NC_009074:3163362:318679731867973187579783Burkholderia pseudomallei 668 chromosome I, complete sequencecapsular polysaccharide export inner-membrane protein3e-0755.5
NC_006348:2372945:239638023963802397162783Burkholderia mallei ATCC 23344 chromosome 1, complete sequencecapsular polysaccharide export inner-membrane protein3e-0755.5
NC_006350:3329477:335291233529123353694783Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative capsular polysaccharide export ABC transporter transmembrane protein3e-0755.5
NC_007434:3588081:361151636115163612298783Burkholderia pseudomallei 1710b chromosome I, complete sequenceCapsule polysaccharide export inner-membrane protein3e-0755.5
NC_008836:1072721:109615610961561096938783Burkholderia mallei NCTC 10229 chromosome II, complete sequencecapsular polysaccharide export inner-membrane protein3e-0755.5
NC_009707:1551412:156805615680561568838783Campylobacter jejuni subsp. doylei 269.97 chromosome, completecapsular polysaccharide ABC transporter permease5e-0755.1
NC_017515:76861:812158121582012798Neisseria meningitidis M04-240196 chromosome, complete genomecapsule polysaccharide export inner-membrane protein CtrC5e-0755.1
NC_015976:1064888:107214710721471072944798Sphingobium sp. SYK-6, complete genomeputative capsule polysaccharide export inner-membrane protein8e-0754.3
NC_012039:257962:258920258920259696777Campylobacter lari RM2100, complete genomecapsular polysaccharide ABC transporter, permease protein1e-0653.5
NC_014311:2606434:262454626245462625352807Ralstonia solanacearum PSI07 chromosome, complete genomecapsule polysaccharide export inner-membrane protein ctrC8e-0651.2
NC_008787:1345988:136502313650231365805783Campylobacter jejuni subsp. jejuni 81-176, complete genomecapsular polysaccharide ABC transporter, permease protein8e-0650.8
NC_015424:1689500:169825316982531699053801Aeromonas veronii B565 chromosome, complete genomecapsule transport protein KpsM8e-0650.8