Pre_GI: BLASTP Hits

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Query: NC_011989:1604939:1604939 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1604939, End: 1605175, Length: 237

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019907:539749:572284572284572517234Liberibacter crescens BT-1 chromosome, complete genomeYrbA protein9e-25112
NC_007626:2283793:229146822914682291725258Magnetospirillum magneticum AMB-1, complete genomeStress-induced morphogen7e-23105
NC_010172:5447189:142761427614512237Methylobacterium extorquens PA1, complete genomeBolA family protein4e-22103
NC_010338:3743000:374596337459633746199237Caulobacter sp. K31, complete genomeBolA family protein5e-1683.2
NC_019771:2783471:279794627979462798182237Anabaena cylindrica PCC 7122, complete genometranscriptional regulator, BolA protein family6e-1682.8
NC_013202:1947876:195994819599481960190243Halomicrobium mukohataei DSM 12286, complete genomeBolA family protein6e-1166.2
NC_007404:1964935:199136119913611991627267Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein6e-1166.2
NC_000963:995500:102256810225681022801234Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein5e-1063.2
NC_017048:225980:252991252991253224234Rickettsia prowazekii str. GvV257 chromosome, complete genomehypothetical protein5e-1063.2
NC_017049:993863:102083710208371021070234Rickettsia prowazekii str. Chernikova chromosome, complete genomehypothetical protein5e-1063.2
NC_017050:995500:102248710224871022720234Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein5e-1063.2
NC_017051:993000:102008010200801020313234Rickettsia prowazekii str. Dachau chromosome, complete genomehypothetical protein5e-1063.2
NC_017056:995500:102247810224781022711234Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein5e-1063.2
NC_007799:284058:290312290312290533222Ehrlichia chaffeensis str. Arkansas, complete genomeBolA family protein7e-1062.4
NC_017062:996197:102337510233751023626252Rickettsia typhi str. B9991CWPP chromosome, complete genomehypothetical protein1e-0962
NC_008752:1119323:112118511211851121433249Acidovorax avenae subsp. citrulli AAC00-1, complete genomeBolA family protein2e-0754.7
NC_012968:325529:338480338480338731252Methylotenera mobilis JLW8, complete genomeBolA family protein3e-0753.9