Pre_GI: BLASTP Hits

Some Help

Query: NC_011988:1036618:1043045 Agrobacterium vitis S4 chromosome 2, complete genome

Start: 1043045, End: 1043698, Length: 654

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014166:2149984:216400021640002164698699Arcobacter nitrofigilis DSM 7299 chromosome, complete genomehypothetical protein2e-1376.3
NC_009937:4350132:435013243501324350821690Azorhizobium caulinodans ORS 571, complete genomehypothetical protein1e-1273.6
NC_011296:1821244:183972918397291840325597Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCbiM5e-0651.2