Pre_GI: BLASTN Hits

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Query: NC_011985:1831961 Agrobacterium radiobacter K84 chromosome 1, complete genome

Start: 1831961, End: 1855211, Length: 23251

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015856:26803426803429827830245Collimonas fungivorans Ter331 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011666:2259447*2259447228593326487Methylocella silvestris BL2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008687:133728*13372816046226735Paracoccus denitrificans PD1222 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_008782:32520923252092327781225721Acidovorax sp. JS42, complete genome3e-0661.9BLASTN svgBLASTP svg