Pre_GI: BLASTP Hits

Some Help

Query: NC_011985:1831961:1853200 Agrobacterium radiobacter K84 chromosome 1, complete genome

Start: 1853200, End: 1854294, Length: 1095

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015856:268034:2696852696852707911107Collimonas fungivorans Ter331 chromosome, complete genomeputative transmembrane ABC transporter protein5e-74278
NC_010001:986500:9901339901339912331101Clostridium phytofermentans ISDg, complete genomeinner-membrane translocator4e-41169
NC_017079:261736:2973132973132984311119Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeABC transporter permease8e-41167
NC_014328:3294086:3306387330638733074751089Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ABC transporter permease5e-39162
NC_021182:380500:3989253989253999981074Clostridium pasteurianum BC1, complete genomeABC-type uncharacterized transport system, permease component6e-37155
NC_007802:1240989:1260529126052912615721044Jannaschia sp. CCS1, complete genomeinner-membrane translocator1e-31137
NC_013517:825100:8265988265988276861089Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator6e-30131
NC_014614:432000:4392694392694403301062Clostridium sticklandii, complete genomeYufP3e-29129
NC_014364:111000:1256021256021267171116Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeinner-membrane translocator4e-29129
NC_015555:1989463:2008288200828820093431056Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, integral membrane subunit8e-29128
NC_016633:14000:1823718237192591023Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeABC transporter permease3e-28126
NC_008262:1721496:1737591173759117386881098Clostridium perfringens SM101, complete genomeABC transporter (permease proteins)-like protein lmo13902e-27123
NC_019970:2263427:2280233228023322812881056Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type uncharacterized transport system, permease component3e-26119
NC_014614:1259236:1272508127250812735721065Clostridium sticklandii, complete genomeABC transporter, permease5e-26119
NC_013205:19295:4301743017440901074Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,inner-membrane translocator2e-25117
NC_011661:1175743:1174647117464711757501104Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator2e-24113
NC_016751:1524848:1536238153623815373921155Marinitoga piezophila KA3 chromosome, complete genomeABC transporter permease2e-23110
NC_010725:4618000:4631792463179246329341143Methylobacterium populi BJ001, complete genomeinner-membrane translocator5e-23108
NC_008782:3252092:326963632696363269980345Acidovorax sp. JS42, complete genomeinner-membrane translocator2e-22107
NC_014363:1396912:1420413142041314215311119Olsenella uli DSM 7084 chromosome, complete genomenucleoside ABC transporter membrane protein2e-22107
NC_010723:2873886:2879822287982228809761155Clostridium botulinum E3 str. Alaska E43, complete genomeABC transporter, permease protein2e-22106
NC_015152:2622000:2635976263597626370881113Spirochaeta sp. Buddy chromosome, complete genomeABC transporter inner membrane protein5e-22105
NC_009012:1901492:1910020191002019111381119Clostridium thermocellum ATCC 27405, complete genomeinner-membrane translocator6e-22105
NC_008054:1815723:1834159183415918352981140Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeABC transporter, permease protein7e-22105
NC_010674:3049500:3056417305641730575711155Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, permease protein2e-21103
NC_016627:1960097:1968797196879719699151119Clostridium clariflavum DSM 19732 chromosome, complete genomeABC transporter permease5e-21102
NC_009617:3647500:3652264365226436533911128Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator6e-21102
NC_013192:664408:6700456700456711121068Leptotrichia buccalis DSM 1135, complete genomeinner-membrane translocator1e-20100
NC_015474:252390:2707762707762717771002Pyrococcus sp. NA2 chromosome, complete genomeribose ABC transporter, permease protein1e-20100
NC_017075:4880807:4902094490209449031521059Rubrivivax gelatinosus IL144, complete genomeputative ABC transporter permease3e-2099.4
NC_009617:4761000:4767914476791447690411128Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator5e-2099
NC_020291:1810527:1821906182190618231261221Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesugar ABC transporter, permease protein6e-2099
NC_020291:5093138:5103323510332351045431221Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomenucleoside ABC transporter membrane protein6e-2098.6
NC_013517:1249466:1253897125389712549611065Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator8e-2098.2
NC_013517:1916020:1923299192329919243631065Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator8e-2098.2
NC_012785:1960500:1963226196322619642631038Kosmotoga olearia TBF 19.5.1, complete genomeinner-membrane translocator1e-1997.8
NC_012472:3625800:3645222364522236462801059Bacillus cereus 03BB102, complete genomesugar ABC transporter, permease protein1e-1997.4
NC_008600:3611038:3627215362721536282731059Bacillus thuringiensis str. Al Hakam, complete genomeABC transporter, permease1e-1997.4
NC_017200:3622838:3642152364215236432101059Bacillus thuringiensis serovar finitimus YBT-020 chromosome,sugar ABC transporter permease2e-1997.1
NC_015425:604842:6120066120066130821077Clostridium botulinum BKT015925 chromosome, complete genomesugar ABC transporter permease2e-1997.1
NC_012796:345000:3638323638323648751044Desulfovibrio magneticus RS-1, complete genomeABC transporter permease protein5e-1995.5
NC_008593:555463:5614955614955625711077Clostridium novyi NT, complete genomeBranched-chain amino acid transport system / permease component superfamily, putative7e-1995.1
NC_013171:312500:3317783317783329441167Anaerococcus prevotii DSM 20548, complete genomeinner-membrane translocator2e-1894
NC_008570:236500:2374942374942386091116Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative transport system permease abc transporter protein2e-1893.6
NC_013169:805124:8038448038448051271284Kytococcus sedentarius DSM 20547, complete genomenucleoside ABC transporter membrane protein2e-1893.6
NC_009376:1442314:1442314144231414433181005Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeinner-membrane translocator4e-1892.8
NC_000868:416958:437044437044438033990Pyrococcus abyssi GE5, complete genomeribose ABC transporter, permease protein2e-1790.5
NC_010723:3499291:3509005350900535100661062Clostridium botulinum E3 str. Alaska E43, complete genomesugar ABC transporter, permease protein3e-1789.7
NC_009033:133800:1353691353691364451077Staphylothermus marinus F1, complete genomeinner-membrane translocator4e-1789.4
NC_015138:2270181:2270181227018122712421062Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeinner-membrane translocator2e-1687
NC_014150:2399997:2405465240546524065261062Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator1e-1481.3
NC_017075:4880807:4880807488080748819071101Rubrivivax gelatinosus IL144, complete genomeputative ABC transporter permease2e-1480.1
NC_014364:815346:8762108762108772531044Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeinner-membrane translocator3e-1479.7
NC_017243:314000:3156913156913168061116Brachyspira intermedia PWS/A chromosome, complete genomeinner-membrane-translocator4e-1479.3
NC_013517:3846747:3852715385271538537461032Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator4e-1479.3
NC_012225:1775264:1792295179229517934101116Brachyspira hyodysenteriae WA1, complete genomeinner-membrane-translocator5e-1479
NC_014330:1957725:1976699197669919778201122Brachyspira pilosicoli 95/1000 chromosome, complete genomeinner-membrane translocator3e-1376.3
NC_013967:1878045:1878045187804518791751131Haloferax volcanii DS2 chromosome, complete genomeABC-type transport system permease protein (probable substrate sugar)6e-1375.5
NC_000961:1481685:1503359150335915043721014Pyrococcus horikoshii OT3, complete genomehypothetical protein7e-1375.1
NC_008710:703740:7200767200767212271152Borrelia turicatae 91E135, complete genomenucleoside transport system permease protein1e-1274.7
NC_015500:78223:7973679736807791044Treponema brennaborense DSM 12168 chromosome, complete genomeABC-type transporter, integral membrane subunit2e-1273.6
NC_014168:994640:9972819972819983541074Segniliparus rotundus DSM 44985 chromosome, complete genomeinner-membrane translocator5e-1272.4
NC_015931:1653604:1659456165945616605471092Pyrolobus fumarii 1A, complete genomeinner-membrane translocator2e-1067.4
NC_014150:1123570:1128252112825211293671116Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator2e-1067
NC_008212:1685367:1694022169402216951131092Haloquadratum walsbyi DSM 16790, complete genomeABC-type ribose transport system, permease protein2e-1067
NC_010673:703816:7226587226587238091152Borrelia hermsii DAH, complete genomenucleoside transport system permease protein5e-1065.9
NC_015315:1458803:1460898146089814619051008Thermoproteus uzoniensis 768-20 chromosome, complete genomeinner-membrane translocator8e-1065.1
NC_014614:1259236:127357712735771274509933Clostridium sticklandii, complete genomeNucleoside transport system permease protein2e-0963.9
NC_016627:1960097:196786219678621968797936Clostridium clariflavum DSM 19732 chromosome, complete genomeABC transporter permease2e-0860.5
NC_009012:1901492:191113919111391912074936Clostridium thermocellum ATCC 27405, complete genomeinner-membrane translocator3e-0859.7
NC_010525:1177154:117715411771541178119966Thermoproteus neutrophilus V24Sta, complete genomeinner-membrane translocator2e-0756.6
NC_014961:335808:3533703533703544911122Desulfurococcus mucosus DSM 2162 chromosome, complete genomenucleoside ABC transporter membrane protein4e-0756.2
NC_001263:243000:2454862454862474982013Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein5e-0755.8