Pre_GI: BLASTP Hits

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Query: NC_011983:508287:509600 Agrobacterium radiobacter K84 chromosome 2, complete genome

Start: 509600, End: 510304, Length: 705

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014639:2452286:247327824732782473922645Bacillus atrophaeus 1942 chromosome, complete genomeacetoin degradation regulation pathway protein7e-0650.8
UCMB5137:2418403:243924624392462439890645Bacillus atrophaeus UCMB-5137acetoin degradation regulation pathway protein7e-0650.8
CP002207:2452286:247327824732782473922645Bacillus atrophaeus 1942, complete genomeacetoin degradation regulation pathway protein7e-0650.8
NC_009328:2808897:282942228294222830066645Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeacetoin dehydrogenase4e-0652
NC_015760:343874:343874343874344533660Streptococcus salivarius CCHSS3, complete genomeacetoin utilization protein acuB2e-0859.3
NC_010337:2339056:235419923541992354837639Heliobacterium modesticaldum Ice1, complete genomeacetoin utilization protein, subunit b2e-0756.2
NC_007604:1875268:189516618951661895630465Synechococcus elongatus PCC 7942, complete genomeCBS1e-0860.1
NC_010525:1314999:133893413389341339782849Thermoproteus neutrophilus V24Sta, complete genomeCBS domain containing membrane protein5e-0754.7
NC_010718:304440:322952322952323395444Natranaerobius thermophilus JW/NM-WN-LF, complete genomeCBS domain containing membrane protein4e-1685.1
NC_012032:3281869:3296370329637032976771308Chloroflexus sp. Y-400-fl, complete genomeCBS domain containing membrane protein3e-0858.9
NC_013740:15401:220122201222680669Acidaminococcus fermentans DSM 20731, complete genomeCBS domain containing membrane protein7e-0857.8
NC_013595:5333000:533572753357275336407681Streptosporangium roseum DSM 43021, complete genomeCBS domain containing membrane protein4e-1168.6
NC_020409:512861:514405514405514854450Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCBS domain containing membrane protein6e-1477.8
NC_013524:1150725:1168816116881611702131398Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeCBS domain containing membrane protein1e-0860.1
NC_009943:748788:7537197537197550171299Candidatus Desulfococcus oleovorans Hxd3, complete genomeCBS domain containing protein1e-0653.5
NC_011899:86800:112220112220113008789Halothermothrix orenii H 168, complete genomeCBS domain containing protein3e-0652
NC_010175:3287500:3301353330135333026601308Chloroflexus aurantiacus J-10-fl, complete genomeCBS domain containing protein3e-0858.9
NC_013411:681907:695985695985696629645Geobacillus sp. Y412MC61, complete genomeCBS domain containing protein4e-0755.1
NC_014915:2900209:290592829059282906572645Geobacillus sp. Y412MC52 chromosome, complete genomeCBS domain containing protein4e-0755.1
NC_015873:1411718:141279514127951413277483Megasphaera elsdenii DSM 20460, complete genomeCBS domain pair6e-0857.8
NC_015873:2260048:227421122742112274660450Megasphaera elsdenii DSM 20460, complete genomeCBS domain protein2e-1169.3
NC_002937:1915787:191829719182971918725429Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeCBS domain protein1e-0653.5
NC_014006:63000:658226582266250429Sphingobium japonicum UT26S chromosome 1, complete genomeCBS domain protein1e-0653.1
NC_015873:1411718:141230814123081412778471Megasphaera elsdenii DSM 20460, complete genomeCBS domain protein3e-1168.9
NC_008358:2808299:282069528206952821129435Hyphomonas neptunium ATCC 15444, complete genomeCBS domain protein1e-0757
NC_014507:758820:763952763952764857906Methanoplanus petrolearius DSM 11571 chromosome, complete genomeCBS domain-containing membrane protein6e-0754.7
NC_015574:2221220:222920722292072230046840Methanobacterium sp. SWAN-1 chromosome, complete genomeCBS domain-containing membrane protein5e-0754.7
NC_015574:2221220:222818322281832229007825Methanobacterium sp. SWAN-1 chromosome, complete genomeCBS domain-containing membrane protein5e-0754.7
NC_016614:1152500:117220611722061173102897Vibrio sp. EJY3 chromosome 2, complete sequenceCBS domain-containing protein8e-0754.3
NC_014973:1598429:161748616174861617944459Geobacter sp. M18 chromosome, complete genomeCBS domain-containing protein6e-0754.3
NC_016593:596500:598361598361598807447Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeCBS domain-containing protein yhcV2e-1169.7
NC_003364:1081846:110785511078551108283429Pyrobaculum aerophilum str. IM2, complete genomeconserved protein with 2 CBS domains5e-0754.7
NC_015680:369777:3858233858233870011179Pyrococcus yayanosii CH1 chromosome, complete genomedehydrogenase7e-0857.4
NC_002607:742886:7669557669557685381584Halobacterium sp. NRC-1, complete genomeGuaB9e-0753.9
NC_007681:482445:4987544987545002501497Methanosphaera stadtmanae DSM 3091, complete genomeGuaB3e-0652.4
NC_016641:5306000:531954853195485319976429Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-0652.8
NC_003901:1568000:1570823157082315719171095Methanosarcina mazei Go1, complete genomehypothetical protein5e-0858.2
NC_009483:2640403:268140726814072681859453Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein4e-1374.7
NC_000917:40111:634636346364353891Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein9e-0857
NC_015474:1094000:1118444111844411196221179Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein7e-0754.3
NC_007907:4859735:487753448775344878058525Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1375.5
NC_016148:951446:961093961093961566474Thermovirga lienii DSM 17291 chromosome, complete genomehypothetical protein9e-1063.9
NC_021171:1661923:166291616629161663371456Bacillus sp. 1NLA3E, complete genomehypothetical protein6e-1064.3
NC_013929:7663631:767822476782247678697474Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-0653.5
NC_010364:733558:7594757594757609741500Halobacterium salinarum R1, complete genomeIMP dehydrogenase8e-0753.9
NC_019962:2129393:2145228214522821467301503Natrinema pellirubrum DSM 15624, complete genomeinosine-5''-monophosphate dehydrogenase1e-0757
NC_019792:3219333:3223444322344432249461503Natronobacterium gregoryi SP2 chromosome, complete genomeinosine-5''-monophosphate dehydrogenase2e-0652.8
NC_019974:3567164:3569935356993535714341500Natronococcus occultus SP4, complete genomeinosine-5'-monophosphate dehydrogenase4e-0652
NC_014171:723155:741351741351741770420Bacillus thuringiensis BMB171 chromosome, complete genomeinosine-5'-monophosphate dehydrogenase2e-0859.3
NC_013407:1205747:1230338123033812318251488Methanocaldococcus vulcanius M7, complete genomeinosine-5'-monophosphate dehydrogenase7e-0857.8
NC_013192:1765981:1777786177778617792611476Leptotrichia buccalis DSM 1135, complete genomeinosine-5'-monophosphate dehydrogenase3e-0652
NC_013642:1425795:1448806144880614502541449Thermotoga naphthophila RKU-10, complete genomeinosine-5'-monophosphate dehydrogenase6e-0754.7
NC_012883:38308:4502645026464771452Thermococcus sibiricus MM 739, complete genomeInosine-5'-monophosphate dehydrogenase4e-0858.2
NC_015666:3606053:3637049363704936385481500Halopiger xanaduensis SH-6 chromosome, complete genomeinosine-5'-monophosphate dehydrogenase3e-0858.5
NC_015474:538544:554570554570554980411Pyrococcus sp. NA2 chromosome, complete genomeinosine-5'-monophosphate dehydrogenase related protein4e-0858.2
NC_014374:1072218:111023211102321111011780Acidilobus saccharovorans 345-15 chromosome, complete genomeInosine-5'-monophosphate dehydrogenase related protein7e-0754.3
NC_006510:591339:593171593171593617447Geobacillus kaustophilus HTA426, complete genomeinosine-5-monophosphate dehydrogenase2e-1169.7
NC_000911:1718820:1734382173438217372102829Synechocystis sp. PCC 6803, complete genomepolyA polymerase9e-0960.5
NC_017039:1717848:1733410173341017362382829Synechocystis sp. PCC 6803 substr. PCC-P, complete genomepolyA polymerase9e-0960.5
NC_017052:1717836:1733398173339817362262829Synechocystis sp. PCC 6803 substr. PCC-N, complete genomepolyA polymerase9e-0960.5
NC_017277:1717637:1733199173319917360272829Synechocystis sp. PCC 6803, complete genomepolyA polymerase9e-0960.5
NC_013642:505518:5100135100135126042592Thermotoga naphthophila RKU-10, complete genomePolynucleotide adenylyltransferase region4e-1065.1
NC_013159:1807599:181042718104271811002576Saccharomonospora viridis DSM 43017, complete genomepredicted signal-transduction protein containing cAMP-binding and CBS domains2e-1479.7
NC_015636:1123053:114163011416301142094465Methanothermococcus okinawensis IH1 chromosome, complete genomeputative signal transduction protein with CBS domains1e-1273.6
NC_012785:20454:347663476635722957Kosmotoga olearia TBF 19.5.1, complete genomeputative signal transduction protein with CBS domains5e-1064.7
NC_011832:2760000:277902127790212779506486Candidatus Methanosphaerula palustris E1-9c, complete genomeputative signal transduction protein with CBS domains5e-0961.2
NC_014374:1072218:111110111111011112027927Acidilobus saccharovorans 345-15 chromosome, complete genomePutative signal transduction protein with CBS domains6e-0651.2
NC_015593:2447844:245179024517902452218429Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeputative signal transduction protein with CBS domains8e-0650.8
NC_015167:1701118:170431817043181704782465Cellulophaga lytica DSM 7489 chromosome, complete genomeputative signal transduction protein with CBS domains1e-0963.5
NC_011992:2279752:228478122847812285236456Acidovorax ebreus TPSY, complete genomeputative signal transduction protein with CBS domains1e-0756.6
NC_013173:1231213:123395312339531234384432Desulfomicrobium baculatum DSM 4028, complete genomeputative signal transduction protein with CBS domains4e-0652
NC_015574:2221220:223209922320992232665567Methanobacterium sp. SWAN-1 chromosome, complete genomeputative signal transduction protein with CBS domains1e-0756.6
NC_008578:591357:625949625949626416468Acidothermus cellulolyticus 11B, complete genomeputative signal-transduction protein with CBS domains2e-0859.3
NC_007964:2152000:216248221624822163162681Nitrobacter hamburgensis X14, complete genomeputative signal-transduction protein with CBS domains8e-1270.9
NC_019977:2375703:2386468238646823875111044Methanomethylovorans hollandica DSM 15978, complete genomeputative transcriptional regulator, contains C-terminal CBS domains3e-0858.5
NC_011978:1812000:1826275182627518288692595Thermotoga neapolitana DSM 4359, complete genomeTRNA nucleotidyl transferase-related protein7e-0857.4
NC_020389:1346358:1346358134635813474521095Methanosarcina mazei Tuc01, complete genomeZinc metalloprotease5e-0858.2