Pre_GI: BLASTP Hits

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Query: NC_011982:130199:147693 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 147693, End: 148139, Length: 447

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011892:352652:355068355068355613546Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completehypothetical protein8e-34142
NC_010511:7553703:757758575775857578130546Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein2e-33140
NC_010125:1:5598559866511054Gluconacetobacter diazotrophicus PAl 5, complete genome2e-26117
NC_010125:1538335:158544315854431586030588Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-26117
NC_010125:381711:387442387442387840399Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein2e-26117
NC_010510:388885:405644405644406147504Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completehypothetical protein3e-21100
NC_020908:4550414:456713845671384567650513Octadecabacter arcticus 238, complete genomeputative transposase2e-2097.8
NC_011894:6382636:640073064007306401362633Methylobacterium nodulans ORS 2060, complete genome3e-1890.5
NC_013854:2148215:216521421652142165840627Azospirillum sp. B510, complete genometransposase6e-1889.7
NC_013854:3200912:320192032019203202513594Azospirillum sp. B510, complete genometransposase6e-1889.7
NC_010125:763141:769574769574770083510Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase2e-1788.2
NC_010125:1051735:107568610756861076156471Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase5e-1786.7
NC_010125:1538335:155807215580721558581510Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase8e-1785.9
NC_016027:1851737:187554518755451875871327Gluconacetobacter xylinus NBRC 3288, complete genometransposase3e-1684.3
NC_016624:112919:125150125150125740591Azospirillum lipoferum 4B plasmid AZO_p5, complete sequencetransposase of ISAli2, IS630 family. ORFA4e-1683.6
NC_016587:523215:528618528618529208591Azospirillum lipoferum 4B plasmid AZO_p4, complete sequencetransposase of ISAli2, IS630 family. ORFA4e-1683.6
NC_011420:2803196:281242228124222812934513Rhodospirillum centenum SW, complete genometransposase, putative7e-1476.3
NC_016622:82418:863458634586941597Azospirillum lipoferum 4B, complete genometransposase of ISAli3, IS630 family. ORFA1e-1168.6
NC_016815:1543308:154758915475891548089501Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceUncharacterized protein y4pG/y4sC1e-1065.5
NC_010125:1051735:107498710749871075190204Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase7e-1062.8
NC_006370:768745:786690786690787160471Photobacterium profundum SS9 chromosome 1, complete sequenceputative transposase and inactivatedderivatives2e-0651.2
NC_020210:1704500:1748735174873517498021068Geobacillus sp. GHH01, complete genometransposase5e-0650.1