Pre_GI: BLASTP Hits

Some Help

Query: NC_011982:130199:137201 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 137201, End: 137929, Length: 729

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003065:27163:395423954240273732Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencebeta-glucosidase2e-1376.3
NC_003308:1:613961396870732Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceC' protein2e-1376.3
NC_003308:1:757875788273696Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceD protein1e-0963.9
NC_003308:1:875287529696945Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceE protein1e-0963.2
NC_003065:27163:409814098141676696Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein1e-0963.9
NC_003065:27163:421554215543099945Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein1e-0963.2