Pre_GI: BLASTP Hits

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Query: NC_011982:130199:135413 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 135413, End: 136204, Length: 792

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011982:130199:1402221402221413211100Agrobacterium vitis S4 plasmid pTiS4, complete sequence5e-145513
NC_011982:130199:1454811454811465811101Agrobacterium vitis S4 plasmid pTiS4, complete sequencetransposase4e-127454
NC_004463:18497:2197221972230811110Bradyrhizobium japonicum USDA 110, complete genomeputative transposase7e-106383
NC_017249:18493:221332213323077945Bradyrhizobium japonicum USDA 6, complete genometransposase1e-105382
NC_009620:1307932:1307932130793213090201089Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceferuloyl esterase1e-101369
NC_009255:1890112:1908471190847119095411071Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative transposase2e-86319
NC_007951:1042291:1047582104758210486521071Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase3e-85315
NC_015724:129331:1308041308041319071104Cupriavidus necator N-1 plasmid BB2p, complete sequencetransposase5e-85313
NC_008554:4586543:4604255460425546053431089Syntrophobacter fumaroxidans MPOB, complete genomeputative transposase6e-81300
NC_009255:1890112:189511218951121896026915Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative transposase3e-79295
NC_009921:3255833:3263570326357032647391170Frankia sp. EAN1pec, complete genomeputative transposase2e-79295
NC_009921:8648994:8662007866200786630951089Frankia sp. EAN1pec, complete genomeputative transposase2e-79295
NC_009921:3473854:3481826348182634829141089Frankia sp. EAN1pec, complete genomeputative transposase2e-79295
NC_015656:1618329:1628835162883516299231089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase4e-78291
NC_015656:2484749:2507008250700825080961089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase4e-78291
NC_015656:632960:6426266426266437141089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase4e-78291
NC_015656:4850833:4854067485406748551551089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase4e-78291
NC_015656:1653450:1668188166818816692761089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase4e-78291
NC_015656:132633:1537311537311548191089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase1e-76286
NC_015656:105840:1098501098501109381089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase1e-76286
NC_017904:2379387:238034723803472381252906Mycobacterium sp. MOTT36Y chromosome, complete genomeISMsm2, transposase2e-76285
NC_008782:2781229:2781490278149027825691080Acidovorax sp. JS42, complete genomeIntegrase, catalytic region2e-76285
NC_008269:577111:5771115771115781931083Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencetransposase1e-75282
NC_009342:135500:1679201679201690111092Corynebacterium glutamicum R chromosome, complete genomehypothetical protein8e-75280
NC_009142:5425763:5433158543315854342521095Saccharopolyspora erythraea NRRL 2338, complete genomeputative transposase8e-74276
NC_009953:3509229:3531373353137335324611089Salinispora arenicola CNS-205 chromosome, complete genomeputative transposase3e-73275
NC_016111:3308310:3330282333028233313701089Streptomyces cattleya NRRL 8057, complete genometransposase2e-73275
NC_016111:4003290:4012859401285940139471089Streptomyces cattleya NRRL 8057, complete genometransposase2e-73275
NC_016111:3308310:3329151332915133302391089Streptomyces cattleya NRRL 8057, complete genometransposase2e-73275
NC_016111:5515462:5522640552264055237281089Streptomyces cattleya NRRL 8057, complete genometransposase2e-73275
NC_003295:112778:1279031279031289941092Ralstonia solanacearum GMI1000, complete genomeISRSO5-TRANSPOSASE PROTEIN2e-72272
NC_007517:2241104:2282539228253922835791041Geobacter metallireducens GS-15, complete genomeputative transposase4e-72271
NC_010623:72500:1035361035361046271092Burkholderia phymatum STM815 chromosome 2, complete sequenceISRSO5-transposase protein3e-72271
NC_003296:262118:2697812697812708721092Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO5-TRANSPOSASE PROTEIN3e-72271
NC_003295:112778:1179921179921190831092Ralstonia solanacearum GMI1000, complete genomeISRSO5-TRANSPOSASE PROTEIN3e-72271
NC_015422:3513689:3547993354799335491201128Alicycliphilus denitrificans K601 chromosome, complete genomeISRSO5-transposase protein1e-71269
NC_013595:5221330:522965252296525230521870Streptosporangium roseum DSM 43021, complete genome3e-70265
NC_012791:2386000:2403297240329724043881092Variovorax paradoxus S110 chromosome 1, complete genomeIntegrase catalytic region4e-70264
NC_010087:376918:4319304319304330151086Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase4e-70264
NC_010801:550270:5557985557985568831086Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu8 transposase4e-70264
NC_010801:481601:4918434918434929281086Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu8 transposase4e-70264
NC_013929:6663889:6664724666472466658151092Streptomyces scabiei 87.22 chromosome, complete genometransposase1e-67256
NC_013929:3953046:3960222396022239612831062Streptomyces scabiei 87.22 chromosome, complete genometransposase2e-67255
NC_021177:7815791:782802778280277828764738Streptomyces fulvissimus DSM 40593, complete genomePutative transposase3e-66251
NC_015572:4063150:4084032408403240850991068Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit3e-65248
NC_007964:2762000:2769198276919827702921095Nitrobacter hamburgensis X14, complete genometISRso5; ISRSO5-transposase protein2e-65248
NC_013441:5025444:5025444502544450265171074Gordonia bronchialis DSM 43247, complete genomeISRSO5-transposase protein5e-65247
NC_010511:6067000:6132310613231061334311122Methylobacterium sp. 4-46 chromosome, complete genomeputative transposase1e-64246
NC_014355:2775979:2791725279172527927771053Candidatus Nitrospira defluvii, complete genomeputative transposase4e-59228
NC_005773:4899252:4934372493437249354451074Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy25, transposase1e-57223
NC_013757:3717500:3718592371859237197041113Geodermatophilus obscurus DSM 43160, complete genomeISMsm5, transposase4e-56218
NC_008786:1553833:1563177156317715642321056Verminephrobacter eiseniae EF01-2, complete genomeputative transposase6e-56217
NC_010625:229478:2434062434062444761071Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase, catalytic region9e-55213
NC_009921:4035225:4053138405313840542321095Frankia sp. EAN1pec, complete genomeputative transposase2e-54212
NC_016906:408720:430799430799431692894Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative transposase4e-51201
NC_009921:3384116:3392563339256333936541092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-49195
NC_009921:2605721:2613266261326626143571092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region5e-49194
NC_016027:54305:786597865979180522Gluconacetobacter xylinus NBRC 3288, complete genometransposase1e-48192
NC_008786:2850736:285317828531782854035858Verminephrobacter eiseniae EF01-2, complete genomeputative transposase2e-48192
NC_009921:3473854:3480622348062234817131092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-48192
NC_009921:8648994:8660847866084786619381092Frankia sp. EAN1pec, complete genomeIntegrase catalytic region3e-48192
NC_008786:2850736:2851717285171728527781062Verminephrobacter eiseniae EF01-2, complete genomeIntegrase, catalytic region6e-48191
NC_008786:2809985:2814159281415928151901032Verminephrobacter eiseniae EF01-2, complete genomeIntegrase, catalytic region6e-48191
NC_008554:956003:9638469638469648861041Syntrophobacter fumaroxidans MPOB, complete genomeferuloyl esterase2e-44179
NC_008786:2809985:281787428178742818458585Verminephrobacter eiseniae EF01-2, complete genomeputative transposase2e-39162
NC_004463:2059500:2066222206622220672861065Bradyrhizobium japonicum USDA 110, complete genomeRSalpha putative transposase1e-38160
NC_004463:1872537:1883214188321418842781065Bradyrhizobium japonicum USDA 110, complete genomeRSalpha putative transposase1e-38160
NC_017249:8137586:816001481600148160961948Bradyrhizobium japonicum USDA 6, complete genometransposase1e-38160
NC_017249:8358438:837020483702048371151948Bradyrhizobium japonicum USDA 6, complete genometransposase1e-38160
NC_017249:908500:920362920362921309948Bradyrhizobium japonicum USDA 6, complete genometransposase1e-38160
NC_016027:1851737:188045018804501880983534Gluconacetobacter xylinus NBRC 3288, complete genometransposase6e-39160
NC_011892:77975:9320393203942731071Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeputative transposase3e-38159
NC_014836:497350:5052555052555063221068Desulfurispirillum indicum S5 chromosome, complete genomeputative transposase1e-38159
NC_014836:497350:5037095037095047761068Desulfurispirillum indicum S5 chromosome, complete genomeputative transposase1e-38159
NC_004463:1898648:1962417196241719634811065Bradyrhizobium japonicum USDA 110, complete genomeputative transposase3e-38158
NC_004463:1898648:1904949190494919060131065Bradyrhizobium japonicum USDA 110, complete genomeRSalpha putative transposase3e-38158
NC_017249:8283701:829388982938898294836948Bradyrhizobium japonicum USDA 6, complete genometransposase5e-38158
NC_003296:556836:562296562296562835540Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeREMNANT OF ISRSO5-TRANSPOSASE PROTEIN8e-38157
NC_010170:3944228:3945315394531539463821068Bordetella petrii, complete genomeputative transposase3e-37155
NC_007489:42500:495504955050038489Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence1e-35149
NC_015675:6464000:646897064689706469923954Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-34146
NC_015572:1:4060140601416711071Methylomonas methanica MC09 chromosome, complete genomeputative transposase8e-34144
NC_009921:5681677:569703456970345697882849Frankia sp. EAN1pec, complete genomeputative transposase3e-30132
NC_009921:4035225:404906740490674049702636Frankia sp. EAN1pec, complete genomeputative transposase1e-29129
NC_015957:7301546:730834073083407308813474Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-28126
NC_014923:5909000:591445759144575915252796Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete2e-28126
NC_003296:556836:564871564871565455585Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeREMNANT OF ISRSO5 TRANSPOSASE PROTEIN5e-27121
NC_015422:4508028:4508028450802845091581131Alicycliphilus denitrificans K601 chromosome, complete genomeputative transposase1e-26120
NC_015422:2858228:2899937289993729010671131Alicycliphilus denitrificans K601 chromosome, complete genomeputative transposase1e-26120
NC_016906:1458158:146980714698071470394588Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative transposase2e-26119
NC_015656:1947810:195399819539981954762765Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-25115
NC_007951:1042291:104664910466491047188540Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-25115
NC_014098:2225174:2233762223376222349071146Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein6e-25114
NC_010172:4064087:408429440842944084764471Methylobacterium extorquens PA1, complete genomehypothetical protein3e-24112
NC_019673:8161242:8181272818127281823301059Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS630 family1e-23110
NC_013216:1442044:1468312146831214694451134Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein1e-23110
NC_013216:4097056:4099180409918041003131134Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein1e-23110
NC_013194:1631134:1649249164924916503881140Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein8e-23107
NC_007489:42500:492574925749529273Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence9e-23107
NC_006361:3047788:305867530586753059424750Nocardia farcinica IFM 10152, complete genomeputative transposase5e-22104
NC_014623:3029853:305533030553303056112783Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase4e-21102
NC_016027:54305:791977919779562366Gluconacetobacter xylinus NBRC 3288, complete genometransposase8e-2097.4
NC_015312:5240653:5245208524520852463111104Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIntegrase catalytic region2e-1685.9
NC_014623:6809000:681692568169256817668744Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase8e-1580.9
NC_009485:1487485:1495408149540814965801173Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase9e-1580.9
NC_007777:2186000:2207079220707922082091131Frankia sp. CcI3, complete genomeputative IS630 family transposase2e-1479.3
NC_015416:2785514:279739527973952798000606Methanosaeta concilii GP-6 chromosome, complete genometransposase1e-1376.6
NC_015635:3860570:388549938854993885855357Microlunatus phosphovorus NM-1, complete genomehypothetical protein2e-1376.3
NC_009921:3384116:3401958340195834031331176Frankia sp. EAN1pec, complete genomeputative transposase5e-1271.6
NC_020126:8512908:852167485216748522066393Myxococcus stipitatus DSM 14675, complete genometransposase1e-1170.5
NC_013595:5282207:529936452993645299846483Streptosporangium roseum DSM 43021, complete genome1e-1170.1
NC_003901:2906493:292085429208542921513660Methanosarcina mazei Go1, complete genometransposase1e-1170.1
NC_008554:956003:972392972392972700309Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein2e-1169.3
NC_010524:824145:836012836012836683672Leptothrix cholodnii SP-6, complete genometransposase3e-1169.3
NC_003552:1234712:123726212372621237921660Methanosarcina acetivorans C2A, complete genome1e-1067
NC_019892:9280367:928552892855289286325798Singulisphaera acidiphila DSM 18658 chromosome, complete genomehypothetical protein1e-1067
NC_015726:2923969:294194329419432942332390Cupriavidus necator N-1 chromosome 1, complete sequencetransposase2e-1066.2
NC_009485:1604942:164366516436651644285621Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase2e-1066.2
NC_010572:1:1950019500206331134Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase3e-1065.5
NC_010572:8493946:8525297852529785264301134Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase3e-1065.5
NC_008536:9538891:9573048957304895741691122Solibacter usitatus Ellin6076, complete genomehypothetical protein5e-1065.1
NC_012691:1144715:1153221115322111542401020Tolumonas auensis DSM 9187, complete genometransposase, putative5e-1065.1
NC_012691:2050957:2054975205497520559941020Tolumonas auensis DSM 9187, complete genometransposase, putative5e-1065.1
NC_007509:3668:474574745747585129Burkholderia sp. 383 chromosome 3, complete sequence2e-0963.2
NC_008553:1038344:105185810518581052481624Methanosaeta thermophila PT, complete genometransposase4e-0962
NC_016111:3052494:3078576307857630796971122Streptomyces cattleya NRRL 8057, complete genometransposase4e-0962
NC_016943:3270308:331252233125223313142621Blastococcus saxobsidens DD2, complete genomeputative transposase5e-0961.6
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family1e-0860.8
NC_012779:2424967:243273824327382433289552Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-0960.8
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF1e-0860.5
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF1e-0860.5
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF1e-0860.5
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF1e-0860.5
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF1e-0860.5
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf1e-0860.5
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf1e-0860.5
NC_008278:5855401:5883223588322358842301008Frankia alni ACN14a, complete genomeTransposase1e-0860.5
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf1e-0860.5
NC_013595:3541012:3550637355063735517671131Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-0860.5
NC_012214:745302:7522477522477532871041Erwinia pyrifoliae Ep1/96, complete genometransposase2e-0860.1
NC_012214:537000:5410455410455420851041Erwinia pyrifoliae Ep1/96, complete genometransposase2e-0860.1
NC_007951:1042291:104722510472251047428204Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-0860.1
NC_013595:9994000:9994889999488999960101122Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-0858.9
NC_017319:192482:195688195688196644957Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS630 ORF8e-0857.8
NC_004851:191709:195760195760196716957Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS630 ORF7e-0857.8
NC_007608:97092:100298100298100906609Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS630 ORF9e-0857.4
NC_009348:2247500:2274776227477622758071032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase9e-0857.4
NC_009348:1663870:1679917167991716809481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-0757
NC_016027:1851737:188099118809911881428438Gluconacetobacter xylinus NBRC 3288, complete genometransposase2e-0756.6
NC_009348:2631759:2642233264223326432641032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_009348:2034500:2045224204522420462551032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_009348:3261500:3270842327084232718731032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_009348:3261500:3268688326868832697191032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_009348:4135002:4157632415763241586631032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_009348:2362163:2381760238176023827911032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_009348:1475955:1480996148099614820271032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_009348:161244:1691281691281701591032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_009350:6987:96149614106451032Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS630 family transposase2e-0756.6
NC_009348:1347500:1354117135411713551481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.6
NC_015957:7408466:744860574486057449471867Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative transposase2e-0756.2
NC_007759:1028977:105511710551171055737621Syntrophus aciditrophicus SB, complete genometransposase and inactivated derivatives2e-0756.2
NC_009348:3819271:3831763383176338327941032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-0756.2
NC_009348:1968826:1977019197701919780501032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-0755.8
NC_016745:1719800:1728949172894917299801032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase5e-0755.1
NC_016745:2280375:2291970229197022930011032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase5e-0755.1
NC_010660:175200:178407178407178829423Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence6e-0754.7
CU928159:30700:441384413844542405Escherichia coli str. 55989 plasmid 55989p, complete genomeputative transposase (fragment), IS630 family3e-0652.8
NC_013595:7302888:730714773071477307701555Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-0652.4
NC_013364:3701895:371511737151173715728612Escherichia coli O111:H- str. 11128, complete genome6e-0651.6
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein5e-0651.6
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase5e-0651.6
NC_009438:236424:2372692372692383001032Shewanella putrefaciens CN-32 chromosome, complete genomeIS630 orf7e-0651.2
NC_015434:2375439:239636523963652397258894Verrucosispora maris AB-18-032 chromosome, complete genomeintegrase catalytic domain-containing protein7e-0651.2
NC_015416:1832759:183915418391541839768615Methanosaeta concilii GP-6 chromosome, complete genometransposase7e-0651.2