Pre_GI: BLASTP Hits

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Query: NC_011979:773673:796097 Geobacter sp. FRC-32, complete genome

Start: 796097, End: 796687, Length: 591

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010814:190673:205816205816206403588Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family2e-79294
NC_002939:1021297:102380710238071024397591Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family4e-70263
NC_010814:155834:180041180041180643603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family2e-28125
NC_013385:1882549:191438119143811914974594Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family7e-28123
NC_010002:2933909:295690429569042957512609Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family3e-1581.6
NC_008609:1976403:207035320703532070961609Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, TetR family5e-1580.9
NC_016112:364723:383161383161383769609Methylomicrobium alcaliphilum chromosome, complete genomeTetR family transcriptional regulator7e-1580.5
NC_014365:2004332:201289820128982013506609Desulfarculus baarsii DSM 2075 chromosome, complete genometranscriptional regulator, TetR family2e-1479
NC_008609:142471:153767153767154375609Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, TetR family1e-1376.3
NC_013456:212150:213521213521214111591Vibrio sp. Ex25 chromosome 1, complete genometranscriptional regulator2e-1375.5
NC_014910:2930860:294618929461892946797609Alicycliphilus denitrificans BC chromosome, complete genomeregulatory protein tetr6e-1270.9
NC_016602:173314:174653174653175243591Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceTetR family transcriptional regulator3e-1168.2
NC_006177:1060428:107883110788311079454624Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator4e-1167.8
NC_010730:346287:371850371850372437588Sulfurihydrogenibium sp. YO3AOP1, complete genometranscriptional regulator, TetR family5e-1167.4
NC_008699:2294361:231661123166112317240630Nocardioides sp. JS614, complete genomeregulatory protein, TetR5e-1064.3
NC_005957:4311679:432219943221994322786588Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator4e-1064.3
NC_011969:4235818:424498242449824245569588Bacillus cereus Q1 chromosome, complete genometranscriptional regulator4e-1064.3
NC_009338:4869700:489432848943284894990663Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator7e-1063.9
NC_010694:63654:826768267683272597Erwinia tasmaniensis, complete genomePutative transcriptional regulator9e-1063.5
NC_011658:4301633:431215343121534312740588Bacillus cereus AH187 chromosome, complete genomeTetR family transcriptional regulator1e-0963.2
NC_007298:1759881:179978717997871800392606Dechloromonas aromatica RCB, complete genomeregulatory protein, TetR1e-0962.8
NC_013971:73037:100096100096100692597Erwinia amylovora ATCC 49946 chromosome, complete genomeTetR family transcriptional regulator2e-0962.4
NC_013961:73037:100096100096100692597Erwinia amylovora, complete genomeHTH-type protein slmA2e-0962.4
NC_016816:127802:143853143853144449597Pantoea ananatis LMG 5342, complete genomeHTH-type protein SlmA1e-0859.7
NC_016947:666627:687288687288687869582Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator2e-0859.3
NC_009338:4869700:489720248972024897861660Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator2e-0858.9
NC_020244:3358399:336320833632083363792585Bacillus subtilis XF-1, complete genomeputative transcriptional regulator (TetR/AcrR family)2e-0858.9
NC_014976:627935:639581639581640174594Bacillus subtilis BSn5 chromosome, complete genomeTetR family transcriptional regulator2e-0858.5
NC_008268:5745620:575548057554805756157678Rhodococcus sp. RHA1, complete genometranscriptional regulator, TetR family3e-0858.5
NC_009077:4419084:442944844294484430158711Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family5e-0857.8
NC_013421:4790696:481487048148704815466597Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, TetR family4e-0857.8
NC_004547:164000:164389164389164985597Erwinia carotovora subsp. atroseptica SCRI1043, complete genomenucleoid occlusion protein4e-0857.8
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator6e-0857.4
NC_014758:310394:344457344457345041585Calditerrivibrio nitroreducens DSM 19672 chromosome, completetranscriptional regulator, tetr family8e-0857
NC_007953:314872:334745334745335404660Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family1e-0756.6
NC_006322:1959918:196177419617741962358585Bacillus licheniformis ATCC 14580, complete genomeYvdT2e-0755.8
NC_017904:2724941:272761627276162728188573Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator2e-0755.5
NC_002655:4606000:462729446272944627932639Escherichia coli O157:H7 EDL933, complete genomenucleoid occlusion protein3e-0755.1
NC_009648:4359875:436248843624884363084597Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomenucleoid occlusion protein3e-0755.1
NC_012731:5074000:507666750766675077263597Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomenucleoid occlusion protein3e-0755.1
NC_016845:5162481:516554751655475166143597Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,nucleoid occlusion protein3e-0755.1
CP002185:3998112:402036340203634020959597Escherichia coli W, complete genomedivision inhibitor4e-0754.7
CU928145:4167043:418951641895164190112597Escherichia coli 55989 chromosome, complete genomedivision inhibitor4e-0754.7
NC_010473:3883701:391009439100943910690597Escherichia coli str. K-12 substr. DH10B, complete genomedivision inhibitor4e-0754.7
NC_011353:4639002:466145746614574662053597Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_011415:4040211:406268440626844063280597Escherichia coli SE11 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_011741:3862935:388517738851773885773597Escherichia coli IAI1 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_012759:3675396:370084337008433701439597Escherichia coli BW2952 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_012967:3729813:375284937528493753445597Escherichia coli B str. REL606 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_013008:4595043:461749846174984618094597Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_011751:4251296:427377242737724274368597Escherichia coli UMN026 chromosome, complete genomenucleoid occlusion protein4e-0754.7
CU928160:3862935:388517738851773885773597Escherichia coli IAI1 chromosome, complete genomedivision inhibitor4e-0754.7
NC_011750:4307166:432941443294144330010597Escherichia coli IAI39 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_010498:4031500:405251540525154053111597Escherichia coli SMS-3-5, complete genometranscriptional regulator domain-containing protein4e-0754.7
NC_011742:3998285:402054540205454021141597Escherichia coli S88 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_010658:3774110:379731637973163797912597Shigella boydii CDC 3083-94, complete genometranscriptional regulator domain protein, TetR family4e-0754.7
NC_002695:4537000:455835345583534558949597Escherichia coli O157:H7 str. Sakai, complete genomenucleoid occlusion protein4e-0754.7
NC_009800:3821824:384407538440753844671597Escherichia coli HS, complete genometranscriptional regulator domain protein, TetR family4e-0754.7
NC_000913:3786124:381251738125173813113597Escherichia coli K12, complete genomenucleoid occlusion protein4e-0754.7
NC_011748:4167043:418951641895164190112597Escherichia coli 55989, complete genomenucleoid occlusion protein4e-0754.7
NC_009801:4108179:413043041304304131026597Escherichia coli E24377A, complete genometranscriptional regulator domain protein, TetR family4e-0754.7
NC_013364:4460500:448189544818954482491597Escherichia coli O111:H- str. 11128, complete genomedivision inhibitor Ttk4e-0754.7
NC_013941:4427000:444829844482984448894597Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHTH-type protein slmA4e-0754.7
NC_017328:3794105:381700838170083817604597Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator4e-0754.7
NC_016856:3916500:393897739389773939573597Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Snucleoid occlusion protein4e-0754.7
NC_016857:3924000:394660039466003947196597Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74nucleoid occlusion protein4e-0754.7
NC_016860:3925500:394818139481813948777597Salmonella enterica subsp. enterica serovar Typhimurium strnucleoid occlusion protein4e-0754.7
NC_016863:3864000:388658438865843887180597Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1nucleoid occlusion protein4e-0754.7
NC_017046:3923000:394542639454263946022597Salmonella enterica subsp. enterica serovar Typhimurium str. 798TetR-family transcriptional regulator4e-0754.7
NC_011740:4007000:403120540312054031801597Escherichia fergusonii ATCC 35469, complete genomedivision inhibitor4e-0754.7
NC_008253:3896704:391896439189643919560597Escherichia coli 536, complete genomeputative TetR-family transcriptional regulator4e-0754.7
NC_011601:4036590:406086440608644061460597Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_011745:4226186:424865842486584249254597Escherichia coli ED1a chromosome, complete genomenucleoid occlusion protein4e-0754.7
NC_016810:3923988:394659939465993947195597Salmonella enterica subsp. enterica serovar Typhimurium strputative TetR family transcriptional regulator4e-0754.7
NC_012125:3840000:386243838624383863034597Salmonella enterica subsp. enterica serovar Paratyphi C strainnucleoid occlusion protein4e-0754.7
NC_011080:3875320:389843638984363899032597Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator domain protein, TetR family4e-0754.7
NC_003197:3902500:392528539252853925881597Salmonella typhimurium LT2, complete genomenucleoid occlusion protein4e-0754.7
NC_010102:3851500:387423238742323874828597Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0754.7
NC_011149:3822000:384465238446523845248597Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator domain protein, TetR family4e-0754.7
NC_006905:3845000:386758538675853868181597Salmonella enterica subsp. enterica serovar Choleraesuis strnucleoid occlusion protein4e-0754.7
NC_011083:3915500:393829539382953938891597Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator domain protein, TetR family4e-0754.7
NC_011094:3778000:380137138013713801967597Salmonella enterica subsp. enterica serovar Schwarzengrund strnucleoid occlusion protein4e-0754.7
NC_011205:3942500:396498639649863965582597Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853nucleoid occlusion protein4e-0754.7
NC_011294:3782655:380638938063893806985597Salmonella enterica subsp. enterica serovar Enteritidis strnucleoid occlusion protein4e-0754.7
NC_006511:3690828:371394437139443714540597Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCnucleoid occlusion protein5e-0754.3
NC_011147:3686500:370961437096143710210597Salmonella enterica subsp. enterica serovar Paratyphi A strnucleoid occlusion protein5e-0754.3
NC_008563:4083558:410577641057764106414639Escherichia coli APEC O1, complete genomeputative transcriptional regulator5e-0754.3
NC_007946:4050762:407298040729804073618639Escherichia coli UTI89, complete genomeputative transcriptional regulator5e-0754.3
NC_004431:4223232:424545042454504246088639Escherichia coli CFT073, complete genomenucleoid occlusion protein4e-0754.3
NC_007613:3637832:366005036600503660688639Shigella boydii Sb227, complete genomeputative transcriptional regulator4e-0754.3
NC_004337:3761865:378476637847663785404639Shigella flexneri 2a str. 301, complete genomenucleoid occlusion protein4e-0754.3
NC_007606:3784847:380672138067213807359639Shigella dysenteriae Sd197, complete genomeputative transcriptional regulator4e-0754.3
NC_004337:3590323:378476637847663785404639Shigella flexneri 2a str. 301, complete genomenucleoid occlusion protein4e-0754.3
NC_013850:109500:124626124626125222597Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family7e-0753.9
NC_011283:105245:119430119430120026597Klebsiella pneumoniae 342 chromosome, complete genomenucleoid occlusion protein7e-0753.9
NC_009792:4658909:467977846797784680374597Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-0753.9
NC_015761:3611993:363512536351253635721597Salmonella bongori NCTC 12419, complete genomeTetR family transcriptional regulator6e-0753.9
NC_015557:90503:105617105617106234618Hydrogenobaculum sp. 3684 chromosome, complete genomeregulatory protein TetR1e-0653.1
NC_020411:90538:105652105652106269618Hydrogenobaculum sp. HO, complete genometranscriptional regulator, TetR family1e-0653.1
NC_015587:90539:105653105653106270618Hydrogenobaculum sp. SHO chromosome, complete genomeregulatory protein TetR1e-0653.1
NC_015567:1127780:116122211612221161902681Serratia sp. AS9 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_015566:1127595:116103711610371161717681Serratia sp. AS12 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
UCMB5137:1594000:160367516036751604283609Bacillus atrophaeus UCMB-5137transcriptional regulator, TetR family protein1e-0653.1
NC_007794:1504449:151167815116781512337660Novosphingobium aromaticivorans DSM 12444, complete genometranscriptional regulator, TetR family1e-0653.1
NC_010612:6113155:612666161266616127263603Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably TetR-family)1e-0652.8
NC_013446:4723380:472676747267674727462696Comamonas testosteroni CNB-2, complete genometranscriptional regulator, TetR family2e-0652.8
NC_002939:173833:191349191349191960612Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family2e-0652.4
NC_015580:1328361:132836113283611329092732Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator2e-0652
NC_008786:18688:243492434924993645Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, TetR family3e-0652
NC_008700:367949:392054392054392647594Shewanella amazonensis SB2B, complete genomeputative transcriptional regulator, TetR family3e-0651.6
NC_014761:516981:525115525115525717603Oceanithermus profundus DSM 14977 chromosome, complete genomeregulatory protein tetr4e-0651.2
NC_009921:3666898:370507837050783705695618Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family4e-0651.2
NC_003910:187630:191621191621192217597Colwellia psychrerythraea 34H, complete genomenucleoid occlusion protein4e-0651.2
NC_007953:1088933:110242611024261103058633Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family6e-0650.8
NC_012803:3691:370253702537624600Micrococcus luteus NCTC 2665, complete genometranscriptional regulator5e-0650.8
NC_016948:2931285:2979810297981029811501341Mycobacterium intracellulare MOTT-64 chromosome, complete genometranscriptional regulator5e-0650.8
NC_009077:4810379:481319748131974813793597Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family5e-0650.8
NC_008595:2687245:2687743268774326890831341Mycobacterium avium 104, complete genomeputative transcriptional regulator5e-0650.8
NC_014831:2201246:221887322188732219736864Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family6e-0650.4
NC_020133:5710661:572194157219415722498558Mycobacterium liflandii 128FXT, complete genomeTetR family transcriptional regulator7e-0650.4
NC_019964:1873167:188650118865011887106606Halovivax ruber XH-70, complete genometranscriptional regulator7e-0650.4
NC_002570:367000:379095379095379688594Bacillus halodurans C-125, complete genomehypothetical protein9e-0650.1
NC_003296:1461538:146352614635261464227702Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN9e-0650.1