Pre_GI: BLASTP Hits

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Query: NC_011979:3880488:3885985 Geobacter sp. FRC-32, complete genome

Start: 3885985, End: 3886362, Length: 378

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008609:142471:158146158146158529384Pelobacter propionicus DSM 2379, complete genomeThioredoxin domain1e-35148
NC_014972:1407632:142269114226911423086396Desulfobulbus propionicus DSM 2032 chromosome, complete genomeThioredoxin domain-containing protein2e-24110
NC_012881:2405414:241932224193222419747426Desulfovibrio salexigens DSM 2638, complete genomeThioredoxin domain protein2e-23107
NC_007519:2773000:278134227813422781605264Desulfovibrio alaskensis G20 chromosome, complete genomethioredoxin3e-21100
NC_007907:5297477:530767253076725308031360Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1478.6
NC_007907:4714844:472669447266944727113420Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-1476.3
NC_011830:1288984:131354113135411314080540Desulfitobacterium hafniense DCB-2, complete genomeThioredoxin domain protein2e-1374.7
NC_011899:1926000:193431819343181934638321Halothermothrix orenii H 168, complete genomethioredoxin3e-1373.9
NC_018866:154252:159884159884160453570Dehalobacter sp. DCA chromosome, complete genomeThioredoxin4e-1373.6
NC_014836:2581939:258604825860482586455408Desulfurispirillum indicum S5 chromosome, complete genomeThioredoxin domain-containing protein2e-1270.9
NC_011896:3252925:3258118325811832594941377Mycobacterium leprae Br4923, complete genomebifunctional thioredoxin reductase/thioredoxin1e-1168.2
NC_002677:3253057:3258250325825032596261377Mycobacterium leprae TN, complete genomebifunctional thioredoxin reductase/thioredoxin1e-1168.2
NC_014654:422013:440049440049440369321Halanaerobium sp. 'sapolanicus' chromosome, complete genomethioredoxin2e-1168.2
NC_010519:275976:299712299712300035324Haemophilus somnus 2336 chromosome, complete genomethioredoxin2e-1167.4
NC_004461:813748:833409833409833723315Staphylococcus epidermidis ATCC 12228, complete genomethioredoxin3e-1167
NC_002976:707827:727476727476727790315Staphylococcus epidermidis RP62A, complete genomethioredoxin3e-1167
NC_014960:1670778:168546616854661685819354Anaerolinea thermophila UNI-1, complete genomethioredoxin5e-1166.6
NC_010793:30488:391713917139497327Orientia tsutsugamushi str. Ikeda, complete genomethioredoxin1e-1065.5
NC_015499:1403447:141993914199391420250312Thermodesulfobium narugense DSM 14796 chromosome, complete genomethioredoxin2e-1064.7
NC_008571:3165143:318375931837593184076318Gramella forsetii KT0803, complete genomethioredoxin2e-1064.7
NC_015681:1201926:121996412199641220287324Thermodesulfatator indicus DSM 15286 chromosome, complete genomethioredoxin2e-1063.9
NC_015573:1979202:199762919976291997946318Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomethioredoxin3e-1063.9
NC_008578:2431074:243217524321752432501327Acidothermus cellulolyticus 11B, complete genomethioredoxin9e-1062.4
NC_008711:4579997:458497445849744585300327Arthrobacter aurescens TC1, complete genome8e-1062.4
NC_018531:4718904:472392747239274724253327Arthrobacter sp. Rue61a chromosome, complete genomethioredoxin TrxA8e-1062.4
NC_015311:2489176:249297524929752493289315Prevotella denticola F0289 chromosome, complete genomethioredoxin1e-0962
NC_013929:5135285:514916551491655149497333Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin1e-0961.6
NC_013501:176073:194886194886195233348Rhodothermus marinus DSM 4252, complete genomethioredoxin1e-0961.6
NC_003888:4251867:428021242802124280544333Streptomyces coelicolor A3(2), complete genomethioredoxin2e-0961.2
NC_013929:2696648:270306927030692703395327Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin3e-0960.8
NC_010723:3133302:314867031486703148981312Clostridium botulinum E3 str. Alaska E43, complete genomethioredoxin2e-0960.8
NC_015873:790961:806686806686807006321Megasphaera elsdenii DSM 20460, complete genomethioredoxin2e-0960.8
NC_010475:1671823:169399816939981694321324Synechococcus sp. PCC 7002, complete genomethioredoxin3e-0960.5
NC_014328:4387303:440454044045404404857318Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative thioredoxin3e-0960.5
NC_011830:3786173:380730038073003807629330Desulfitobacterium hafniense DCB-2, complete genomethioredoxin3e-0960.5
NC_020409:329915:338253338253338573321Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeThioredoxin-14e-0960.5
NC_015564:4727630:473037047303704730690321Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomethioredoxin5e-0960.1
NC_020291:5752099:576770257677025768010309Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomethioredoxin TrxA4e-0960.1
NC_018515:989616:993165993165993494330Desulfosporosinus meridiei DSM 13257 chromosome, complete genomethioredoxin4e-0960.1
NC_019897:4014485:402547040254704025790321Thermobacillus composti KWC4 chromosome, complete genomethioredoxin4e-0960.1
NC_008820:808886:826442826442826765324Prochlorococcus marinus str. MIT 9303, complete genomeThioredoxin6e-0959.7
NC_009665:4675289:469803446980344698360327Shewanella baltica OS185 chromosome, complete genomethioredoxin6e-0959.7
NC_017030:7557295:757744875774487577774327Corallococcus coralloides DSM 2259 chromosome, complete genomethioredoxin8e-0959.3
NC_009464:1804791:182452218245221824857336Uncultured methanogenic archaeon RC-I, complete genomethioredoxin8e-0959.3
NC_009464:1804791:182493318249331825274342Uncultured methanogenic archaeon RC-I, complete genomethioredoxin1e-0858.9
NC_014540:2908912:2920031292003129212571227Burkholderia sp. CCGE1003 chromosome 2, complete sequencethioredoxin9e-0958.9
NC_015953:3684065:370046137004613700793333Streptomyces sp. SirexAA-E chromosome, complete genomethioredoxin1e-0858.5
NC_014210:5752651:576142057614205761743324Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,thioredoxin1e-0858.5
NC_008528:331260:342289342289342609321Oenococcus oeni PSU-1, complete genomeThiol-disulfide isomerase and thioredoxin1e-0858.5
NC_007164:2446879:245284724528472453170324Corynebacterium jeikeium K411, complete genomethioredoxin1e-0858.5
NC_011026:2269986:227686222768622277188327Chloroherpeton thalassium ATCC 35110, complete genomethioredoxin2e-0858.2
NC_016114:3655005:367608836760883676423336Streptomyces flavogriseus ATCC 33331 chromosome, complete genomethioredoxin2e-0858.2
NC_007907:456164:468669468669468995327Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0858.2
NC_018750:3964784:398081139808113981134324Streptomyces venezuelae ATCC 10712, complete genomeThioredoxin2e-0857.8
NC_008702:1094663:110816211081621108488327Azoarcus sp. BH72, complete genomethioredoxin-disulfide reductase2e-0857.8
NC_013173:1231213:124439012443901244710321Desulfomicrobium baculatum DSM 4028, complete genomethioredoxin2e-0857.4
NC_015556:515641:536731536731537057327Pseudomonas fulva 12-X chromosome, complete genomethioredoxin3e-0857.4
NC_008148:2290806:230989923098992310210312Rubrobacter xylanophilus DSM 9941, complete genomethioredoxin3e-0857.4
NC_007644:1694879:171051817105181710847330Moorella thermoacetica ATCC 39073, complete genomethioredoxin3e-0857.4
NC_009925:4864367:487975748797574880080324Acaryochloris marina MBIC11017, complete genomethioredoxin3e-0857.4
NC_004557:2711702:271263827126382712955318Clostridium tetani E88, complete genomethioredoxin3e-0857
NC_008261:2920999:293669729366972937011315Clostridium perfringens ATCC 13124, complete genomethioredoxin5e-0856.6
NC_012673:2535427:258217825821782582492315Exiguobacterium sp. AT1b, complete genomethioredoxin6e-0856.2
NC_007512:865500:868511868511868816306Pelodictyon luteolum DSM 273, complete genomeThioredoxin6e-0856.2
NC_017059:967309:967309967309968235927Rhodospirillum photometricum DSM 122, complete genomeThioredoxin-related6e-0856.2
NC_014215:1929000:194297019429701943395426Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Thioredoxin8e-0855.8
NC_019960:469412:476924476924477241318Prevotella dentalis DSM 3688 chromosome 1, complete sequencethioredoxin8e-0855.8
NC_012721:1986436:1989409198940919906471239Burkholderia glumae BGR1 chromosome 2, complete genomeThioredoxin8e-0855.8
NC_015222:1607757:163141016314101631736327Nitrosomonas sp. AL212 chromosome, complete genomethioredoxin7e-0855.8
NC_018644:446102:463530463530463856327Alpha proteobacterium HIMB59 chromosome, complete genomethioredoxin7e-0855.8
NC_013170:1020339:102392210239221024230309Cryptobacterium curtum DSM 15641, complete genomethioredoxin7e-0855.8
CU928160:2785792:278579227857922786211420Escherichia coli IAI1 chromosome, complete genomethioredoxin 29e-0855.5
CP002516:1196000:121578112157811216200420Escherichia coli KO11, complete genomethioredoxin9e-0855.5
CP002185:2889656:288965628896562890075420Escherichia coli W, complete genomethioredoxin 29e-0855.5
NC_010084:2484000:251755625175562517993438Burkholderia multivorans ATCC 17616 chromosome 1, completethioredoxin9e-0855.5
NC_010804:996837:100678010067801007217438Burkholderia multivorans ATCC 17616 chromosome 1, completethioredoxin 29e-0855.5
NC_007948:3541987:356307035630703563507438Polaromonas sp. JS666, complete genomethioredoxin1e-0755.1
NC_014828:107802:131356131356131679324Ethanoligenens harbinense YUAN-3 chromosome, complete genomethioredoxin1e-0755.1
NC_014151:4106624:410959241095924109924333Cellulomonas flavigena DSM 20109 chromosome, complete genomethioredoxin1e-0755.1
NC_012857:41946:699246992470310387Ralstonia pickettii 12D chromosome 2, complete genomeThioredoxin domain protein2e-0754.7
NC_010678:900389:928367928367928753387Ralstonia pickettii 12J chromosome 2, complete sequenceThioredoxin domain2e-0754.7
NC_007626:4688777:469237346923734692729357Magnetospirillum magneticum AMB-1, complete genomeThiol-disulfide isomerase and thioredoxins2e-0754.7
NC_015145:4232283:423982242398224240148327Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomethioredoxin2e-0754.3
NC_008312:2264832:228772722877272288308582Trichodesmium erythraeum IMS101, complete genomeThioredoxin domain2e-0754.3
NC_008390:2156188:217406821740682174397330Burkholderia cepacia AMMD chromosome 1, complete sequencethioredoxin2e-0754.3
NC_007333:3626510:363557936355793635902324Thermobifida fusca YX, complete genomethioredoxin3e-0753.9
NC_008541:4679022:468637946863794686705327Arthrobacter sp. FB24 chromosome 1, complete sequencethioredoxin3e-0753.5
NC_017093:8757291:875826787582678758584318Actinoplanes missouriensis 431, complete genomeputative thioredoxin4e-0753.5
NC_014151:4021394:403812340381234038446324Cellulomonas flavigena DSM 20109 chromosome, complete genomethioredoxin4e-0753.5
NC_014828:637523:641268641268641591324Ethanoligenens harbinense YUAN-3 chromosome, complete genomethioredoxin4e-0753.5
NC_011886:4376261:438368343836834384009327Arthrobacter chlorophenolicus A6, complete genomethioredoxin6e-0753.1
NC_014550:3839389:384451338445133844836324Arthrobacter arilaitensis Re117, complete genomethioredoxin5e-0753.1
NC_011884:1998559:201983120198312020169339Cyanothece sp. PCC 7425, complete genomeThioredoxin domain protein5e-0753.1
NC_015760:2009425:201342720134272013741315Streptococcus salivarius CCHSS3, complete genomethiol-disulfide isomerase and thioredoxins5e-0753.1
NC_007519:3355768:337799233779923378432441Desulfovibrio alaskensis G20 chromosome, complete genomethioredoxin4e-0753.1
NC_014973:4630132:466032346603234660652330Geobacter sp. M18 chromosome, complete genomethioredoxin4e-0753.1
NC_012115:1415827:142686214268621427182321Nautilia profundicola AmH, complete genomethioredoxin6e-0752.8
NC_018607:2375344:239415123941512394468318Brachyspira pilosicoli B2904 chromosome, complete genomethioredoxin8e-0752.4
NC_019908:1467000:148643014864301486747318Brachyspira pilosicoli P43/6/78 chromosome, complete genomethioredoxin8e-0752.4
NC_007794:262402:284887284887285792906Novosphingobium aromaticivorans DSM 12444, complete genomethioredoxin8e-0752.4
NC_013205:1275012:130219913021991302540342Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,thioredoxin1e-0652
NC_005810:515744:5358245358245376111788Yersinia pestis biovar Microtus str. 91001, complete genomethiol:disulfide interchange protein precursor1e-0652
NC_006155:456000:4763734763734781601788Yersinia pseudotuberculosis IP 32953, complete genomethiol:disulfide interchange protein precursor1e-0652
NC_017154:331921:3511873511873529741788Yersinia pestis D106004 chromosome, complete genomethiol:disulfide interchange protein1e-0652
NC_006905:2805877:280587728058772806296420Salmonella enterica subsp. enterica serovar Choleraesuis strthioredoxin 2, redox factor1e-0652
NC_010102:283364:302564302564302983420Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0652
NC_011080:2789744:279098527909852791404420Salmonella enterica subsp. enterica serovar Newport str. SL254,putative thioredoxin1e-0652
NC_011149:2701916:270191627019162702335420Salmonella enterica subsp. enterica serovar Agona str. SL483,putative thioredoxin1e-0652
NC_006449:1606948:160882216088221609136315Streptococcus thermophilus CNRZ1066, complete genomethioredoxin2e-0651.6
NC_006448:1604627:160650116065011606815315Streptococcus thermophilus LMG 18311, complete genomethioredoxin2e-0651.6
NC_014221:169996:174418174418174750333Truepera radiovictrix DSM 17093 chromosome, complete genomethioredoxin2e-0651.6
NC_013929:9450747:945339294533929453841450Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin 21e-0651.6
NC_009850:1862602:188315818831581883475318Arcobacter butzleri RM4018, complete genomethioredoxin1e-0651.6
NC_014910:4316706:431767643176764318584909Alicycliphilus denitrificans BC chromosome, complete genomethioredoxin2e-0651.2
NC_006055:183823:208059208059208367309Mesoplasma florum L1, complete genomethioredoxin2e-0651.2
NC_013849:397947:399580399580399945366Ferroglobus placidus DSM 10642 chromosome, complete genomeThioredoxin domain protein2e-0651.2
NC_007907:761486:763683763683764009327Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0651.2
NC_011894:3988500:400935740093574009680324Methylobacterium nodulans ORS 2060, complete genomethioredoxin2e-0650.8
NC_011894:5056901:508773850877385088061324Methylobacterium nodulans ORS 2060, complete genomethioredoxin3e-0650.8
NC_016628:935420:941785941785942111327Vibrio furnissii NCTC 11218 chromosome 2, complete sequencethioredoxin3e-0650.4
NC_013521:4240468:424347642434764243817342Sanguibacter keddieii DSM 10542, complete genomethioredoxin4e-0650.1