Pre_GI: BLASTP Hits

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Query: NC_011979:3712845:3730348 Geobacter sp. FRC-32, complete genome

Start: 3730348, End: 3731220, Length: 873

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010814:1739706:176001217600121760893882Geobacter lovleyi SZ, complete genomeshikimate 5-dehydrogenase1e-42173
NC_014122:549932:588069588069588902834Methanocaldococcus infernus ME chromosome, complete genomeshikimate 5-dehydrogenase2e-37155
NC_015573:1979202:198059219805921981548957Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeShikimate dehydrogenase3e-34145
NC_009922:42696:466674666747527861Alkaliphilus oremlandii OhILAs, complete genomeshikimate 5-dehydrogenase4e-33141
NC_015474:252390:275352275352276173822Pyrococcus sp. NA2 chromosome, complete genomeshikimate 5-dehydrogenase3e-30132
NC_014804:341663:351086351086351904819Thermococcus barophilus MP chromosome, complete genomeshikimate 5-dehydrogenase I alpha7e-29127
NC_014221:554764:561386561386562216831Truepera radiovictrix DSM 17093 chromosome, complete genomeshikimate 5-dehydrogenase1e-27123
NC_016633:1798758:181916918191691820050882Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeshikimate 5-dehydrogenase4e-26118
NC_010125:1:145151451515372858Gluconacetobacter diazotrophicus PAl 5, complete genomeputative shikimate dehydrogenase4e-25115
NC_009785:1414892:141729314172931418150858Streptococcus gordonii str. Challis substr. CH1, complete genomeshikimate 5-dehydrogenase7e-25114
NC_014355:399938:404381404381405235855Candidatus Nitrospira defluvii, complete genomeshikimate 5-dehydrogenase7e-25114
NC_000868:416958:432656432656433450795Pyrococcus abyssi GE5, complete genomeshikimate 5-dehydrogenase1e-23110
NC_012880:1585255:158825915882591589128870Dickeya dadantii Ech703, complete genomeShikimate dehydrogenase substrate binding domain protein2e-23110
NC_009921:8549757:855440285544028555274873Frankia sp. EAN1pec, complete genomeShikimate dehydrogenase substrate binding domain protein2e-23109
NC_012108:2542328:254495725449572545772816Desulfobacterium autotrophicum HRM2, complete genomeAroE12e-23109
NC_015387:1091403:111343611134361114248813Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeShikimate dehydrogenase5e-23108
NC_007955:2074844:209948120994812100290810Methanococcoides burtonii DSM 6242, complete genomeshikimate 5-dehydrogenase6e-23108
NC_004741:1792442:179361417936141794480867Shigella flexneri 2a str. 2457T, complete genomeshikimate 5-dehydrogenase1e-22107
NC_019977:253895:258493258493259314822Methanomethylovorans hollandica DSM 15978, complete genomeshikimate 5-dehydrogenase2e-22106
NC_013446:2164974:218289021828902183702813Comamonas testosteroni CNB-2, complete genomeshikimate 5-dehydrogenase5e-21101
NC_008044:3024125:302898630289863029816831Silicibacter sp. TM1040, complete genomeshikimate 5-dehydrogenase5e-21101
NC_009952:3596399:363194536319453632781837Dinoroseobacter shibae DFL 12, complete genomeshikimate dehydrogenase1e-20100
NC_005042:1719055:173579817357981736700903Prochlorococcus marinus subsp. marinus str. CCMP1375, completeShikimate 5-dehydrogenase3e-2099.4
NC_015424:4251369:427545242754524276273822Aeromonas veronii B565 chromosome, complete genomeShikimate dehydrogenase3e-2099
NC_008343:2389710:239037423903742391243870Granulibacter bethesdensis CGDNIH1, complete genomeshikimate 5-dehydrogenase5e-2098.6
NC_015977:2807782:284480328448032845672870Roseburia hominis A2-183 chromosome, complete genomeshikimate 5-dehydrogenase1e-1997.1
NC_015519:1888917:189192318919231892795873Tepidanaerobacter sp. Re1 chromosome, complete genomeShikimate dehydrogenase2e-1893.6
NC_008258:1750964:175531417553141756063750Shigella flexneri 5 str. 8401, complete genomeputative oxidoreductase2e-1893.2
NC_002695:4153394:416503241650324165850819Escherichia coli O157:H7 str. Sakai, complete genomeshikimate 5-dehydrogenase1e-1790.5
NC_008261:817295:828901828901829716816Clostridium perfringens ATCC 13124, complete genomeshikimate 5-dehydrogenase1e-1790.5
NC_003366:863437:875075875075875890816Clostridium perfringens str. 13, complete genomeshikimate 5-dehydrogenase1e-1790.5
NC_008262:784878:814079814079814894816Clostridium perfringens SM101, complete genomeshikimate 5-dehydrogenase2e-1789.7
CP002185:3627992:364298936429893643807819Escherichia coli W, complete genomedehydroshikimate reductase, NAD(P)-binding protein3e-1789
NC_015518:1095879:110422611042261105014789Acidianus hospitalis W1 chromosome, complete genomeShikimate dehydrogenase substrate binding domain-containing protein9e-1787.8
NC_014960:216965:223354223354224232879Anaerolinea thermophila UNI-1, complete genomeshikimate dehydrogenase1e-1687.4
NC_007802:179780:187014187014187850837Jannaschia sp. CCS1, complete genomeShikimate 5-dehydrogenase1e-1687
NC_007614:620500:620577620577621410834Nitrosospira multiformis ATCC 25196 chromosome 1, completeshikimate 5-dehydrogenase1e-1687
NC_008786:2489104:249396824939682494834867Verminephrobacter eiseniae EF01-2, complete genomeshikimate 5-dehydrogenase3e-1686.3
NC_015563:2702787:270994927099492710788840Delftia sp. Cs1-4 chromosome, complete genomeShikimate dehydrogenase4e-1685.5
NC_014727:95875:953469534695906561Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,shikimate 5-dehydrogenase and fad-dependent oxidase domain8e-1684.3
NC_013282:3962188:397488539748853975703819Cronobacter turicensis, complete genomeShikimate dehydrogenase2e-1583.2
NC_009440:1810301:181730518173051818123819Metallosphaera sedula DSM 5348 chromosome, complete genomeshikimate dehydrogenase3e-1582.8
NC_008593:2281896:230243323024332303245813Clostridium novyi NT, complete genomeshikimate 5-dehydrogenase3e-1582.4
NC_010067:4149298:414990241499024150723822Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1582.4
NC_015151:1403500:140835914083591409162804Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeshikimate dehydrogenase substrate binding domain protein3e-1582.4
NC_017986:5467279:548320254832025484020819Pseudomonas putida ND6 chromosome, complete genomeshikimate 5-dehydrogenase6e-1581.6
NC_015425:2528549:255259725525972553409813Clostridium botulinum BKT015925 chromosome, complete genomeshikimate 5-dehydrogenase1e-1480.9
NC_009512:3068495:306768030676803068498819Pseudomonas putida F1, complete genomeshikimate 5-dehydrogenase1e-1480.9
NC_008577:44184:486384863849516879Shewanella sp. ANA-3 chromosome 1, complete sequenceshikimate 5-dehydrogenase2e-1479.7
NC_013016:1801000:181996818199681820777810Neisseria meningitidis alpha14 chromosome, complete genomeshikimate 5-dehydrogenase4e-1479
NC_007181:141299:149768149768150559792Sulfolobus acidocaldarius DSM 639, complete genomeshikimate/quinate 5-dehydrogenase4e-1479
NC_003116:2063500:207914620791462079961816Neisseria meningitidis Z2491, complete genomeshikimate dehydrogenase5e-1478.6
NC_017512:1824966:184383718438371844646810Neisseria meningitidis WUE 2594, complete genomeshikimate dehydrogenase5e-1478.6
NC_003112:364869:364869364869365678810Neisseria meningitidis MC58, complete genomeshikimate 5-dehydrogenase5e-1478.6
NC_017516:364404:364404364404365213810Neisseria meningitidis H44/76 chromosome, complete genomeshikimate 5-dehydrogenase5e-1478.6
NC_002946:1556000:157380215738021574611810Neisseria gonorrhoeae FA 1090, complete genomeputative shikimate dehydrogenase5e-1478.6
NC_008767:1829500:184875318487531849562810Neisseria meningitidis FAM18, complete genomeshikimate dehydrogenase5e-1478.6
NC_006511:3364448:337965333796533380471819Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCshikimate 5-dehydrogenase4e-1478.6
NC_011035:1564821:158304715830471583886840Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative shikimate dehydrogenase4e-1478.6
NC_017511:1467090:148588314858831486722840Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative shikimate dehydrogenase4e-1478.6
NC_014109:393500:414783414783415619837Candidatus Riesia pediculicola USDA chromosome, complete genomeshikimate 5-dehydrogenase7e-1477.8
NC_010120:1814592:183351518335151834324810Neisseria meningitidis 053442, complete genomeshikimate dehydrogenase8e-1477.8
NC_010634:2810815:281667928166792817497819Yersinia pseudotuberculosis PB1/+, complete genomeshikimate dehydrogenase substrate binding subunit1e-1377
NC_006155:2893802:289966628996662900484819Yersinia pseudotuberculosis IP 32953, complete genomeshikimate 5-dehydrogenase1e-1377
NC_013730:834500:860262860262861005744Spirosoma linguale DSM 74, complete genomeShikimate dehydrogenase substrate binding domain protein2e-1376.6
NC_017518:2041282:205627220562722057081810Neisseria meningitidis NZ-05/33 chromosome, complete genomeshikimate 5-dehydrogenase8e-1374.7
NC_017514:1885154:190204319020431902852810Neisseria meningitidis M01-240149 chromosome, complete genomeshikimate 5-dehydrogenase8e-1374.7
NC_014614:2500301:250359825035982504434837Clostridium sticklandii, complete genomeShikimate dehydrogenase1e-1273.9
NC_003106:2272313:228195322819532282735783Sulfolobus tokodaii str. 7, complete genomehypothetical shikimate 5-dehydrogenase2e-1169.7
NC_014924:3065430:308387430838743084725852Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeshikimate 5-dehydrogenase4e-1168.9
NC_001263:72681:783807838079201822Deinococcus radiodurans R1 chromosome 1, complete sequenceshikimate 5-dehydrogenase5e-1168.6
NC_016932:832748:837471837471838286816Corynebacterium pseudotuberculosis 316 chromosome, complete genomeshikimate 5-dehydrogenase6e-1168.2
NC_006087:28490:300263002630745720Leifsonia xyli subsp. xyli str. CTCB07, complete genomeshikimate 5-dehydrogenase7e-1168.2
NC_009921:8549757:861204286120428612860819Frankia sp. EAN1pec, complete genomeShikimate dehydrogenase substrate binding domain protein8e-1167.8
NC_012779:3176820:323099232309923231780789Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-1167.8
NC_014329:844622:849345849345850160816Corynebacterium pseudotuberculosis FRC41 chromosome, completeshikimate 5-dehydrogenase1e-1067
NC_017513:1845069:186073918607391861548810Neisseria meningitidis G2136 chromosome, complete genomeshikimate 5-dehydrogenase2e-1066.6
NC_015696:47484:660136601366789777Francisella sp. TX077308 chromosome, complete genomeshikimate 5-dehydrogenase I alpha8e-0961.2
NC_016788:1315877:133229913322991333141843Corynebacterium diphtheriae HC04 chromosome, complete genomeshikimate 5-dehydrogenase1e-0860.8
NC_016783:1313008:135718813571881358030843Corynebacterium diphtheriae INCA 402 chromosome, complete genomeshikimate 5-dehydrogenase1e-0860.8
NC_002935:1315019:135919613591961360065870Corynebacterium diphtheriae NCTC 13129, complete genomeshikimate 5-dehydrogenase1e-0860.5
NC_002947:4293252:429723042972304298069840Pseudomonas putida KT2440, complete genomeshikimate 5-dehydrogenase1e-0860.5
NC_016786:1316436:133285813328581333700843Corynebacterium diphtheriae HC01 chromosome, complete genomeshikimate 5-dehydrogenase2e-0860.1
NC_016782:1316467:133288813328881333730843Corynebacterium diphtheriae 241 chromosome, complete genomeshikimate 5-dehydrogenase2e-0860.1
NC_009664:3969609:397398339739833974843861Kineococcus radiotolerans SRS30216, complete genomeShikimate dehydrogenase substrate binding domain protein2e-0860.1
NC_008010:105665:115638115638116507870Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceShikimate dehydrogenase substrate binding-like2e-0859.7
NC_015470:831863:8318638318638332961434Chlamydophila psittaci 6BC chromosome, complete genomebifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein2e-0859.7
NC_017291:829577:8295778295778310101434Chlamydophila psittaci C19/98 chromosome, complete genomebifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein2e-0859.7
NC_016002:2652500:267029226702922671170879Pseudogulbenkiania sp. NH8B, complete genomeshikimate dehydrogenase substrate binding domain containing protein4e-0858.9
NC_013521:1976331:197885019788501979704855Sanguibacter keddieii DSM 10542, complete genomeshikimate 5-dehydrogenase4e-0858.9
NC_016781:844613:849336849336850037702Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeshikimate 5-dehydrogenase5e-0858.5
NC_012588:1655615:166559216655921666401810Sulfolobus islandicus M.14.25 chromosome, complete genomeshikimate dehydrogenase substrate binding domain-containing protein6e-0858.2
NC_012632:1785210:179149017914901792299810Sulfolobus islandicus M.16.27 chromosome, complete genomeshikimate dehydrogenase6e-0858.2
NC_012726:1685442:169172216917221692531810Sulfolobus islandicus M.16.4 chromosome, complete genomeshikimate dehydrogenase6e-0858.2
NC_017275:1705827:171580417158041716613810Sulfolobus islandicus HVE10/4 chromosome, complete genomeshikimate dehydrogenase6e-0858.2
NC_016802:1317365:133378713337871334629843Corynebacterium diphtheriae HC02 chromosome, complete genomeshikimate 5-dehydrogenase8e-0857.8
NC_009512:2238437:225730122573012258122822Pseudomonas putida F1, complete genomeShikimate dehydrogenase substrate binding, N-terminal domain protein9e-0857.8
NC_016785:1297208:131447113144711315313843Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeshikimate 5-dehydrogenase1e-0757.4
NC_016789:1334514:137869613786961379538843Corynebacterium diphtheriae PW8 chromosome, complete genomeshikimate 5-dehydrogenase2e-0756.6
NC_016799:1343020:138834013883401389182843Corynebacterium diphtheriae 31A chromosome, complete genomeshikimate 5-dehydrogenase2e-0756.6
NC_016800:1344189:136145213614521362294843Corynebacterium diphtheriae BH8 chromosome, complete genomeshikimate 5-dehydrogenase2e-0756.6
NC_016801:1361597:137801613780161378858843Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeshikimate 5-dehydrogenase2e-0756.6
NC_013522:1683326:170519917051991706059861Thermanaerovibrio acidaminovorans DSM 6589, complete genomeShikimate dehydrogenase substrate binding domain protein3e-0756.2
NC_015563:2702787:271476127147612715594834Delftia sp. Cs1-4 chromosome, complete genomeShikimate dehydrogenase1e-0653.9
NC_016625:171341:192373192373193188816Burkholderia sp. YI23 chromosome 2, complete sequenceshikimate dehydrogenase1e-0653.9