Pre_GI: BLASTN Hits

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Query: NC_011963:3073283 Rhodobacter sphaeroides KD131 chromosome 1, complete sequence

Start: 3073283, End: 3097179, Length: 23897

Host Lineage: Rhodobacter sphaeroides; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Halophilic, purple nonsulfur photosynthetic bacterium. Capable of producing high levels of biohydrogen (H2). Originally isolated from sea mud off the coast of DaeBu Island, South Korea. Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to grow using photosynthesis, chemosynthesis, and usually can grow under both anaerobic and aerobic conditions. The most extensively studied bacteria with regards to its photosynthetic capabilities which includes the structure, function and regulation of its photosynthetic membranes, its mechanisms of CO2 and nitrogen fixation, cytochrome diversity and its electron transport systems. It can grow aerobically and anaerobically in the light and anaerobically in the dark. It produces an intracytoplasmic membrane system consisting of membrane invaginations where the light harvesting complexes (LH1 and LH2) and the reaction center are synthesized. Furthermore, it has the ability to detoxify metal oxides and oxyanions and hence has a role in bioremediation.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011958:92378992378995236428576Rhodobacter sphaeroides KD131 chromosome 2, complete genome05828BLASTN svgBLASTP svg
NC_007494:86790186790189976631866Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence05739BLASTN svgBLASTP svg
NC_007493:207932*20793223466126730Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence05416BLASTN svgBLASTP svg
NC_007493:628243*62824365684428602Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence05039BLASTN svgBLASTP svg
NC_007494:73940373940376864729245Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence03237BLASTN svgBLASTP svg
NC_009050:427000*42700045201225013Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence02783BLASTN svgBLASTP svg
NC_009050:811358*81135885387342516Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence01116BLASTN svgBLASTP svg
NC_007494:71452571452574074926225Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence0668BLASTN svgBLASTP svg
NC_011958:73575573575578945053696Rhodobacter sphaeroides KD131 chromosome 2, complete genome3e-151543BLASTN svgBLASTP svg
NC_009040:43791*437916586622076Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete6e-100373BLASTN svgBLASTP svg
NC_014034:2899120*2899120292265123532Rhodobacter capsulatus SB1003 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_007802:3575739*3575739362449148753Jannaschia sp. CCS1, complete genome4e-33151BLASTN svgBLASTP svg
NC_007493:1672163*1672163171910246940Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence4e-33151BLASTN svgBLASTP svg
NC_007298:2689731*2689731272716337433Dechloromonas aromatica RCB, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007493:1929000*1929000195414225143Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_003911:2042389*2042389206571223324Silicibacter pomeroyi DSS-3, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015259:2757081*2757081278813031050Polymorphum gilvum SL003B-26A1 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003911:3864852*3864852389829633445Silicibacter pomeroyi DSS-3, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007802:1991211*1991211202618734977Jannaschia sp. CCS1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008686:2417000*2417000243519018191Paracoccus denitrificans PD1222 chromosome 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008686:50750*507507732426575Paracoccus denitrificans PD1222 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007347:1215358*1215358123935023993Ralstonia eutropha JMP134 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008702:2039462*2039462206354724086Azoarcus sp. BH72, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012673:2023297*2023297204277319477Exiguobacterium sp. AT1b, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009667:2860818*2860818288999929182Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009667:1371924*1371924140112629203Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_007489:42500425006678724288Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence3e-0661.9BLASTN svgBLASTP svg