Pre_GI: BLASTP Hits

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Query: NC_011963:742158:752264 Rhodobacter sphaeroides KD131 chromosome 1, complete sequence

Start: 752264, End: 752632, Length: 369

Host Lineage: Rhodobacter sphaeroides; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Halophilic, purple nonsulfur photosynthetic bacterium. Capable of producing high levels of biohydrogen (H2). Originally isolated from sea mud off the coast of DaeBu Island, South Korea. Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to grow using photosynthesis, chemosynthesis, and usually can grow under both anaerobic and aerobic conditions. The most extensively studied bacteria with regards to its photosynthetic capabilities which includes the structure, function and regulation of its photosynthetic membranes, its mechanisms of CO2 and nitrogen fixation, cytochrome diversity and its electron transport systems. It can grow aerobically and anaerobically in the light and anaerobically in the dark. It produces an intracytoplasmic membrane system consisting of membrane invaginations where the light harvesting complexes (LH1 and LH2) and the reaction center are synthesized. Furthermore, it has the ability to detoxify metal oxides and oxyanions and hence has a role in bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009049:1125681:113783011378301138429600Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceCheD, stimulates methylation of MCP proteins3e-61233
NC_009428:1827352:183982518398251840424600Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomechemoreceptor glutamine deamidase CheD2e-35147
NC_012968:1352463:135673813567381357346609Methylotenera mobilis JLW8, complete genomeCheD, stimulates methylation of MCP protein2e-1271.6
NC_014323:4792048:483467548346754835286612Herbaspirillum seropedicae SmR1 chromosome, complete genomechemoreceptor glutamine deamidase3e-1167.4
NC_004460:1237129:125917712591771259821645Vibrio vulnificus CMCP6 chromosome II, complete sequenceChemotaxis protein6e-1166.2
NC_005140:1820970:184349318434931844137645Vibrio vulnificus YJ016 chromosome II, complete sequencechemotaxis protein8e-1165.9
NC_007298:778723:803115803115803720606Dechloromonas aromatica RCB, complete genomeCheD7e-1165.9
NC_015222:1607757:161330516133051613916612Nitrosomonas sp. AL212 chromosome, complete genomeCheD7e-1062.8
NC_017243:1698000:171175617117561712349594Brachyspira intermedia PWS/A chromosome, complete genomechemotaxis protein CheD1e-0962
NC_012225:569590:583560583560584153594Brachyspira hyodysenteriae WA1, complete genomechemotaxis protein CheD1e-0962
NC_018607:921923:950130950130950723594Brachyspira pilosicoli B2904 chromosome, complete genomechemotaxis protein CheD4e-0960.1
NC_014330:505412:514323514323514916594Brachyspira pilosicoli 95/1000 chromosome, complete genomechemotaxis protein CheD4e-0960.1
NC_018604:1943561:194814019481401948733594Brachyspira pilosicoli WesB complete genomechemotaxis protein CheD4e-0960.1
NC_019908:121178:149850149850150443594Brachyspira pilosicoli P43/6/78 chromosome, complete genomechemotaxis protein CheD4e-0960.1
NC_015497:2997275:301504130150413015661621Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeCheD7e-0959.3
NC_015474:1035834:104675510467551047246492Pyrococcus sp. NA2 chromosome, complete genomechemoreceptor glutamine deamidase CheD8e-0855.8
NC_000868:1502276:150970415097041510195492Pyrococcus abyssi GE5, complete genomechemotaxis protein ched4e-0753.5
NC_000961:435489:444354444354444842489Pyrococcus horikoshii OT3, complete genomehypothetical protein4e-0753.5
NC_017095:166896:191016191016191495480Fervidobacterium pennivorans DSM 9078 chromosome, complete genomechemotaxis protein8e-0752.4
NC_000917:940088:945172945172945645474Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein3e-0650.8
NC_015707:705628:706233706233706715483Thermotoga thermarum DSM 5069 chromosome, complete genomeCheD4e-0650.1