Pre_GI: BLASTP Hits

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Query: NC_011961:891815:915217 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 915217, End: 917241, Length: 2025

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006177:1422932:1438983143898314410642082Symbiobacterium thermophilum IAM 14863, complete genomeputative DNA helicase1e-36154
NC_011880:56543:6051160511625982088Cyanothece sp. PCC 7425 plasmid pP742501, complete sequenceUvrD/REP helicase4e-31136
NC_009523:2769154:2783054278305427851862133Roseiflexus sp. RS-1 chromosome, complete genomeUvrD/REP helicase5e-24113
NC_005125:2887319:2900009290000929021322124Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-1894.7
NC_008278:6854759:6868682686868268708412160Frankia alni ACN14a, complete genomeputative DNA helicase6e-0756.6
NC_008146:861319:8862418862418883522112Mycobacterium sp. MCS, complete genomeUvrD/REP helicase3e-0654.7
NC_008705:868623:8949708949708970812112Mycobacterium sp. KMS, complete genomeUvrD/REP helicase3e-0654.7