Pre_GI: BLASTP Hits

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Query: NC_011961:85083:110885 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 110885, End: 112699, Length: 1815

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008095:8890464:8892622889262288944121791Myxococcus xanthus DK 1622, complete genomeCRISPR-associated protein Crm22e-23111
NC_013894:1:5498549873571860Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated protein, Crm2 family6e-22106
NC_009972:791702:8041338041338059831851Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomeCRISPR-associated RAMP Crm2 family protein7e-22105
NC_015387:1898496:1914656191465619164251770Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Crm2 family1e-21105
NC_013526:65495:7202472024738981875Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein, Crm2 family5e-21103
NC_014221:1541517:1550925155092515528651941Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Crm2 family1e-20101
NC_008148:258292:2693142693142712031890Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated protein Crm22e-1687.8
NC_020126:10091703:1011079810110798101126391842Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cmr2 family protein2e-1584.7
NC_011901:1860887:1909040190904019109531914Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeCRISPR-associated protein, Crm2 family2e-1584.3
NC_014221:1786122:1795984179598417974111428Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Crm2 family2e-1274.7
NC_000917:1666836:1677510167751016805243015Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein2e-1171.6
NC_014915:332784:3561323561323577721641Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein, Crm2 family9e-0859.3
NC_007333:1743890:1819567181956718213511785Thermobifida fusca YX, complete genomeCRISPR-associated TM1811 family protein2e-0757.8