Pre_GI: BLASTP Hits

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Query: NC_011961:304158:334887 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 334887, End: 336293, Length: 1407

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011961:304158:3332593332593347041446Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceV-type sodium ATP synthase subunit J (Na(+)-translocating ATPase subunit J)6e-54211
NC_014098:2332938:2332938233293823342751338Bacillus tusciae DSM 2912 chromosome, complete genomepotassium uptake protein, TrkH family2e-29130
NC_006274:1367377:1369801136980113711441344Bacillus cereus E33L, complete genomepotassium/sodium uptake protein9e-29128
NC_011658:1437813:1440043144004314413861344Bacillus cereus AH187 chromosome, complete genomeTrkH family potassium uptake protein2e-28127
NC_011969:1437514:1439744143974414410871344Bacillus cereus Q1 chromosome, complete genomepotassium uptake protein, trkh family2e-28127
NC_016771:1397292:1399522139952214008651344Bacillus cereus NC7401, complete genomeTrkH family potassium uptake protein2e-28127
NC_019978:2071435:2092298209229820936321335Halobacteroides halobius DSM 5150, complete genomepotassium uptake protein, TrkH family1e-28127
NC_003997:1334000:1335076133507613364191344Bacillus anthracis str. Ames, complete genomepotassium uptake protein, TrkH family4e-28126
NC_007530:1332768:1335199133519913365421344Bacillus anthracis str. 'Ames Ancestor', complete genomepotassium uptake protein, trkh family4e-28126
NC_005945:1334000:1335145133514513364881344Bacillus anthracis str. Sterne, complete genomepotassium uptake protein, TrkH family4e-28126
NC_012581:2885519:2902653290265329039961344Bacillus anthracis str. CDC 684 chromosome, complete genomeTrkH family potassium uptake protein4e-28126
NC_012659:1334000:1335099133509913364421344Bacillus anthracis str. A0248, complete genomepotassium uptake protein, TrkH family4e-28126
NC_014221:266638:2809972809972823551359Truepera radiovictrix DSM 17093 chromosome, complete genomepotassium uptake protein, TrkH family3e-28126
NC_011772:1329730:1329730132973013310731344Bacillus cereus G9842, complete genomepotassium uptake protein, TrkH family9e-28125
NC_014335:1329414:1331851133185113331941344Bacillus cereus biovar anthracis str. CI chromosome, completepotassium/sodium uptake protein6e-28125
NC_016779:1321723:1321723132172313230661344Bacillus cereus F837/76 chromosome, complete genomeTrkH family potassium uptake protein5e-28125
UCMB5137:2128500:2129178212917821305151338Bacillus atrophaeus UCMB-5137potassium transporter ATPase2e-27123
NC_011725:1383798:1386313138631313876561344Bacillus cereus B4264 chromosome, complete genomeTrkH family potassium uptake protein3e-27123
NC_004722:1352000:1354522135452213558651344Bacillus cereus ATCC 14579, complete genomePotassium uptake protein KtrB3e-27123
NC_014171:1356000:1358119135811913594621344Bacillus thuringiensis BMB171 chromosome, complete genomepotassium uptake protein KtrB4e-27122
NC_014976:1174430:1197858119785811991951338Bacillus subtilis BSn5 chromosome, complete genomepotassium transporter ATPase7e-27122
NC_010184:1373375:1373375137337513747181344Bacillus weihenstephanensis KBAB4, complete genomepotassium uptake protein, TrkH family4e-26119
NC_014378:425779:4257794257794271161338Acetohalobium arabaticum DSM 5501 chromosome, complete genomepotassium uptake protein, TrkH family8e-26118
NC_014210:618500:6397136397136411341422Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,H(+)-transporting two-sector ATPase2e-24114
NC_004347:4441110:4461229446122944625931365Shewanella oneidensis MR-1, complete genomepotassium uptake protein KtrB7e-24112
NC_014759:2099623:2117651211765121194711821Marivirga tractuosa DSM 4126 chromosome, complete genomeh(+)-transporting two-sector atpase8e-24112
NC_007802:3575739:3612219361221936135681350Jannaschia sp. CCS1, complete genomeK+ transporter Trk3e-22106
NC_013441:4539035:4547292454729245486231332Gordonia bronchialis DSM 43247, complete genomeH(+)-transporting two-sector ATPase1e-20101
NC_019978:2071435:2090202209020220915271326Halobacteroides halobius DSM 5150, complete genomepotassium uptake protein, TrkH family9e-21101
NC_014166:33138:4990249902512301329Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepotassium uptake protein, TrkH family1e-1998.2
NC_013595:5221330:5221330522133052226881359Streptosporangium roseum DSM 43021, complete genomeH(+)-transporting two-sector ATPase2e-1997.8
NC_015930:1397524:1401561140156114028981338Lactococcus garvieae ATCC 49156, complete genomepotassium transporter protein1e-1894.7
NC_014759:2099623:2115804211580421176271824Marivirga tractuosa DSM 4126 chromosome, complete genomeh(+)-transporting two-sector atpase1e-1894.7
NC_004663:6104875:6113157611315761149861830Bacteroides thetaiotaomicron VPI-5482, complete genomeK+ uptake protein6e-1892.4
NC_013440:5543667:5545397554539755475262130Haliangium ochraceum DSM 14365, complete genomeH(+)-transporting two-sector ATPase2e-1790.5
NC_014965:2200974:2218747221874722201171371Vibrio vulnificus MO6-24/O chromosome I, complete sequencepotassium uptake protein, integral membrane component, KtrB3e-1790.5
NC_015977:935798:9357989357989371351338Roseburia hominis A2-183 chromosome, complete genometrk system potassium uptake protein TrkH6e-1789.4
NC_012781:3087467:3105370310537031067311362Eubacterium rectale ATCC 33656, complete genomehypothetical protein1e-1688.2
NC_011295:929293:9499389499389512871350Coprothermobacter proteolyticus DSM 5265, complete genomeKtrB1e-1687.8
NC_014933:2195683:2211784221178422136131830Bacteroides helcogenes P 36-108 chromosome, complete genomeH(+)-transporting two-sector ATPase4e-1479.7
NC_007929:67810:8631086310876981389Lactobacillus salivarius subsp. salivarius UCC118, complete genomePotassium uptake protein ktrB1e-1378.2
NC_013161:4209554:4216841421684142182051365Cyanothece sp. PCC 8802, complete genomepotassium uptake protein, TrkH family1e-1378.2
NC_017208:1380870:138087013808701381517648Bacillus thuringiensis serovar chinensis CT-43 chromosome, completepotassium uptake protein KtrB3e-0756.6