Pre_GI: BLASTP Hits

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Query: NC_011961:304158:323584 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 323584, End: 324174, Length: 591

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010718:2265447:226931722693172269901585Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF11853e-41167
NC_016584:432610:442928442928443506579Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein4e-40164
NC_014632:113420:124744124744125331588Ilyobacter polytropus DSM 2926 chromosome, complete genomehypothetical protein7e-39160
NC_015519:426948:444379444379444966588Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein4e-37154
NC_008825:404000:407048407048407602555Methylibium petroleiphilum PM1, complete genomehypothetical protein5e-29127
NC_009439:3770282:379487437948743795464591Pseudomonas mendocina ymp, complete genomehypothetical protein8e-28123
NC_010501:2511887:251278925127892513385597Pseudomonas putida W619, complete genomeprotein of unknown function DUF11856e-28123
NC_007434:2449721:247574424757442476331588Burkholderia pseudomallei 1710b chromosome I, complete sequencePeptide synthase6e-25113
NC_018643:857911:909015909015909602588Alpha proteobacterium HIMB5 chromosome, complete genomehypothetical protein2e-22105
NC_015556:1188500:120156812015681202161594Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF11853e-2098.2
NC_010515:1205258:121447212144721215017546Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceprotein of unknown function DUF11852e-1892
NC_011001:302500:319952319952320497546Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein2e-1891.7