Pre_GI: BLASTP Hits

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Query: NC_011961:304158:313789 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 313789, End: 314685, Length: 897

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008702:2039462:204118420411842042116933Azoarcus sp. BH72, complete genomeprobable Catechol 2,3-dioxygenase9e-1477.8
NC_021171:2019755:203625020362502037164915Bacillus sp. 1NLA3E, complete genomecatechol 2,3 dioxygenase3e-1479.3
NC_010645:1341475:1361237136123713622411005Bordetella avium 197N, complete genomecatechol 2,3-dioxygenase (metapyrocatechase)3e-1892.4
NC_008061:2368517:2369510236951023705801071Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase4e-0859.3
NC_008543:2871747:2896402289640228974721071Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceglyoxalase/bleomycin resistance protein/dioxygenase4e-0859.3
NC_011001:63986:8662286622876921071Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative dioxygenase8e-0857.8
NC_010515:1375091:1378039137803913791091071Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase3e-0859.3
NC_008391:1210451:123441912344191235354936Burkholderia cepacia AMMD chromosome 2, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase5e-1995.1
NC_015514:3351052:3354194335419433552191026Cellulomonas fimi ATCC 484 chromosome, complete genomeBiphenyl-2,3-diol 1,2-dioxygenase3e-1375.9
NC_018697:505915:516478516478517398921Cycloclasticus sp. P1 chromosome, complete genomeCatechol 2,3 dioxygenase, XylE1e-1790.9
NC_017033:1939507:194101019410101941978969Frateuria aurantia DSM 6220 chromosome, complete genomeputative ring-cleavage extradiol dioxygenase8e-0754.7
NC_014206:2971304:298556329855632986534972Geobacillus sp. C56-T3 chromosome, complete genomecatechol 2,3 dioxygenase2e-1789.7
NC_014650:475662:502669502669503652984Geobacillus sp. Y4.1MC1 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1789.4
NC_017506:1100679:113707611370761137948873Marinobacter adhaerens HP15 chromosome, complete genomecatechol 2,3-dioxygenase7e-1581.3
NC_011666:1572487:159318215931821594102921Methylocella silvestris BL2, complete genomecatechol 2,3 dioxygenase1e-1894
NC_016947:1480282:148880214888021489728927Mycobacterium intracellulare MOTT-02 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase6e-1065.1
NC_009077:4419084:444511844451184446098981Mycobacterium sp. JLS, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase7e-1271.6
NC_008705:2763131:278752127875212788390870Mycobacterium sp. KMS, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase2e-0859.7
NC_008146:2744612:276963327696332770502870Mycobacterium sp. MCS, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD2e-0859.7
NC_017904:1725180:173459417345941735562969Mycobacterium sp. MOTT36Y chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase2e-1066.2
NC_009512:3282500:328511932851193286057939Pseudomonas putida F1, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase6e-1271.6
NC_016147:730810:742222742222743166945Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecatechol 2,3 dioxygenase2e-1583.2
NC_016147:1788219:180071218007121801656945Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecatechol 2,3-dioxygenase6e-1478.2
NC_016885:1153277:117191011719101172824915Pyrobaculum oguniense TE7 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase9e-1684.3
NC_007347:1215358:122718912271891228172984Ralstonia eutropha JMP134 chromosome 1, complete sequenceCatechol 2,3-dioxygenase2e-0756.6
NC_007973:1411714:143766914376691438613945Ralstonia metallidurans CH34 chromosome 1, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase1e-1687
NC_012522:5847699:5859095585909558601801086Rhodococcus opacus B4, complete genomeputative catechol 2,3-dioxygenase7e-1374.7
NC_008148:2231045:2253126225312622541601035Rubrobacter xylanophilus DSM 9941, complete genomeCatechol 2,3-dioxygenase8e-1374.7
NC_003911:3864852:389731638973163898296981Silicibacter pomeroyi DSS-3, complete genomeextradiol ring-cleavage dioxygenase family protein2e-1789.7
NC_009511:4582188:460373346037334604704972Sphingomonas wittichii RW1 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase9e-0651.2
NC_013730:4811911:483133248313324832291960Spirosoma linguale DSM 74, complete genomeCatechol 2,3-dioxygenase2e-1170.1
NC_016582:2069677:206879620687962069680885Streptomyces bingchenggensis BCW-1 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase6e-0858.5
NC_015957:196000:214414214414215349936Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase2e-0756.6
NC_017275:377800:3825393825393835461008Sulfolobus islandicus HVE10/4 chromosome, complete genomecatechol 2,3 dioxygenase1e-0963.9
NC_017275:594951:613328613328614275948Sulfolobus islandicus HVE10/4 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase5e-1272
NC_013769:316789:3407663407663417731008Sulfolobus islandicus L.D.8.5 chromosome, complete genomecatechol 2,3-dioxygenase3e-0962.8
NC_012589:842270:843742843742844689948Sulfolobus islandicus L.S.2.15, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1272.8
NC_012589:347020:3524223524223534291008Sulfolobus islandicus L.S.2.15, complete genomecatechol 2,3 dioxygenase1e-0963.5
NC_012588:620353:638651638651639598948Sulfolobus islandicus M.14.25 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase2e-1273.2
NC_012632:638347:656645656645657592948Sulfolobus islandicus M.16.27 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1272.8
NC_012726:641763:660381660381661328948Sulfolobus islandicus M.16.4 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase2e-1273.2
NC_012726:346539:3519503519503529571008Sulfolobus islandicus M.16.4 chromosome, complete genomecatechol 2,3 dioxygenase1e-0963.9
NC_017276:675229:676701676701677648948Sulfolobus islandicus REY15A chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase5e-1272
NC_017276:337286:3428503428503438571008Sulfolobus islandicus REY15A chromosome, complete genomecatechol 2,3 dioxygenase5e-1065.1
NC_012622:940990:942462942462943409948Sulfolobus islandicus Y.G.57.14 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1272.8
NC_012623:1631985:164739216473921648339948Sulfolobus islandicus Y.N.15.51 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1272.8
NC_002754:1061851:1062806106280610638131008Sulfolobus solfataricus P2, complete genomeCatechol 2,3-dioxygenase (metapyrocatechase)2e-1066.6
NC_014831:2133060:2143087214308721440941008Thermaerobacter marianensis DSM 12885 chromosome, complete genomecatechol 2,3 dioxygenase2e-1996.7
NC_011961:891815:913237913237914136900Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecatechol 2,3-dioxygenase1e-48193
NC_011961:891815:914189914189915154966Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence3,4-dihydroxyphenylacetate 2,3-dioxygenase8e-1994.7
NC_014974:1076565:1082784108278410837881005Thermus scotoductus SA-01 chromosome, complete genomecatechol 2,3 dioxygenase5e-23108
NC_014974:1076565:109546210954621096436975Thermus scotoductus SA-01 chromosome, complete genomecatechol 2,3 dioxygenase1e-1790.9