Pre_GI: BLASTP Hits

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Query: NC_011961:304158:304158 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 304158, End: 305006, Length: 849

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014814:1425500:143845914384591439355897Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein6e-1581.3
NC_009338:2042664:207080620708062071702897Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein7e-1581.3
NC_012731:2739964:276219227621922763061870Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-1479.7
NC_016845:2781438:280260228026022803471870Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-1377.4
NC_016111:613729:615425615425616318894Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-1375.1
NC_016948:678939:680992680992681849858Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein9e-1167.8
NC_017904:666285:6662856662856673371053Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-1067
NC_016947:666627:668681668681669538858Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein1e-1067
NC_017033:1672313:167231316723131673239927Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein2e-1066.6
NC_020133:5485528:5507516550751655085741059Mycobacterium liflandii 128FXT, complete genomehypothetical protein4e-0962.4
NC_012522:5895946:591403459140345914858825Rhodococcus opacus B4, complete genomehypothetical protein8e-0961.2
NC_013947:2351208:236099223609922361831840Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein2e-0653.5
NC_015564:1199330:121691612169161217866951Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomehypothetical protein1e-0550.8