Pre_GI: BLASTP Hits

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Query: NC_011959:972798:998584 Thermomicrobium roseum DSM 5159, complete genome

Start: 998584, End: 999093, Length: 510

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013921:1344000:136766313676631368100438Thermoanaerobacter italicus Ab9 chromosome, complete genomelipoprotein signal peptidase2e-1375.5
NC_015958:1465631:149004114900411490475435Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeLipoprotein signal peptidase8e-1372.8
NC_014209:1363151:138763513876351388069435Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,lipoprotein signal peptidase1e-1272.8
NC_010321:1361748:138567613856761386110435Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completelipoprotein signal peptidase6e-1270.1
NC_019978:875941:887779887779888234456Halobacteroides halobius DSM 5150, complete genomelipoprotein signal peptidase5e-1167
NC_009052:1211989:121741412174141217929516Shewanella baltica OS155, complete genomelipoprotein signal peptidase5e-0960.5
NC_009665:1332751:133655113365511337066516Shewanella baltica OS185 chromosome, complete genomelipoprotein signal peptidase5e-0960.5
NC_011663:3818886:383536738353673835882516Shewanella baltica OS223 chromosome, complete genomelipoprotein signal peptidase5e-0960.5
NC_016584:4961688:498158149815814982057477Desulfosporosinus orientis DSM 765 chromosome, complete genomelipoprotein signal peptidase5e-0960.5
NC_016901:1367443:137286813728681373383516Shewanella baltica OS678 chromosome, complete genomelipoprotein signal peptidase1e-0859.3
NC_009997:1368471:137227113722711372786516Shewanella baltica OS195, complete genomelipoprotein signal peptidase1e-0859.3
NC_008782:1308007:1322310132231013234041095Acidovorax sp. JS42, complete genomelipoprotein signal peptidase2e-0858.5
NC_008321:3512471:353006935300693530581513Shewanella sp. MR-4, complete genomelipoprotein signal peptidase2e-0858.2
NC_008577:3738758:376016937601693760681513Shewanella sp. ANA-3 chromosome 1, complete sequencelipoprotein signal peptidase2e-0858.2
NC_008322:3585601:360094336009433601455513Shewanella sp. MR-7, complete genomelipoprotein signal peptidase2e-0858.2
NC_016633:3069518:313214131321413132605465Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomelipoprotein signal peptidase4e-0857.4
NC_010320:1268355:131636313163631316827465Thermoanaerobacter sp. X514 chromosome, complete genomelipoprotein signal peptidase6e-0857
NC_014410:800500:842496842496842960465Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,lipoprotein signal peptidase6e-0857
NC_010003:449192:469283469283469747465Petrotoga mobilis SJ95, complete genomelipoprotein signal peptidase6e-0857
NC_004347:3670145:368528636852863685798513Shewanella oneidensis MR-1, complete genomelipoprotein signal peptidase6e-0857
NC_016627:4323370:432401343240134324477465Clostridium clariflavum DSM 19732 chromosome, complete genomelipoprotein signal peptidase8e-0856.6
NC_011901:3363500:336757233675723368063492Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completelipoprotein signal peptidase5e-0753.5
NC_011653:1226035:125479912547991255347549Thermosipho africanus TCF52B, complete genomesignal peptidase II1e-0652.8
NC_009092:1263964:126990312699031270415513Shewanella loihica PV-4, complete genomelipoprotein signal peptidase1e-0652.8
NC_007298:3271071:328797732879773288456480Dechloromonas aromatica RCB, complete genomePeptidase A8, signal peptidase II3e-0651.2
NC_009901:1309724:131363413136341314146513Shewanella pealeana ATCC 700345, complete genomelipoprotein signal peptidase4e-0650.8
NC_008700:1115436:111924511192451119751507Shewanella amazonensis SB2B, complete genomeSignal peptidase II5e-0650.4