Pre_GI: BLASTP Hits

Some Help

Query: NC_011959:1965158:1982741 Thermomicrobium roseum DSM 5159, complete genome

Start: 1982741, End: 1983322, Length: 582

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000961:372000:420712420712421278567Pyrococcus horikoshii OT3, complete genomeCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase3e-21101
NC_013894:672840:678180678180678758579Thermocrinis albus DSM 14484 chromosome, complete genomeCDP-alcohol phosphatidyltransferase6e-2097.1
NC_012490:3094857:311751831175183118213696Rhodococcus erythropolis PR4, complete genomephosphatidylinositol synthase2e-1995.9
NC_015474:983468:998514998514999074561Pyrococcus sp. NA2 chromosome, complete genomeCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase2e-1995.9
NC_014315:3207684:322505332250533225646594Nitrosococcus watsoni C-113 chromosome, complete genomeCDP-alcohol phosphatidyltransferase3e-1891.7
NC_009767:433432:442325442325442951627Roseiflexus castenholzii DSM 13941, complete genomeCDP-alcohol phosphatidyltransferase8e-1890.1
NC_016802:1317365:137626513762651376918654Corynebacterium diphtheriae HC02 chromosome, complete genomeputative phosphatidyltransferase1e-1685.9
NC_016782:1385800:139028013902801390933654Corynebacterium diphtheriae 241 chromosome, complete genomeputative phosphatidyltransferase2e-1685.5
NC_016783:1397975:141235914123591413012654Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative phosphatidyltransferase2e-1685.5
NC_016785:1357500:136816313681631368816654Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative phosphatidyltransferase2e-1685.5
NC_016786:1359064:139025013902501390903654Corynebacterium diphtheriae HC01 chromosome, complete genomeputative phosphatidyltransferase2e-1685.5
NC_016789:1432000:143700514370051437658654Corynebacterium diphtheriae PW8 chromosome, complete genomeputative phosphatidyltransferase2e-1685.5
NC_016800:1411000:141961614196161420269654Corynebacterium diphtheriae BH8 chromosome, complete genomeputative phosphatidyltransferase2e-1685.5
NC_016801:1422500:143326814332681433921654Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative phosphatidyltransferase2e-1685.5
NC_016799:1439000:144357814435781444231654Corynebacterium diphtheriae 31A chromosome, complete genomeputative phosphatidyltransferase3e-1685.1
NC_016790:1345638:135941313594131360066654Corynebacterium diphtheriae VA01 chromosome, complete genomeputative phosphatidyltransferase5e-1684
NC_016788:1376000:138681213868121387465654Corynebacterium diphtheriae HC04 chromosome, complete genomeputative phosphatidyltransferase5e-1684
NC_016787:1350676:138334813833481384001654Corynebacterium diphtheriae HC03 chromosome, complete genomeputative phosphatidyltransferase5e-1684
NC_002935:1378566:140313114031311403784654Corynebacterium diphtheriae NCTC 13129, complete genomePutative phosphatidyltransferase5e-1684
NC_015683:1432995:143510514351051435794690Corynebacterium ulcerans BR-AD22 chromosome, complete genomephosphatidylglycerophosphate synthase1e-1582.8
NC_007484:3358000:337475433747543375341588Nitrosococcus oceani ATCC 19707, complete genomeCDP-alcohol phosphatidyltransferase2e-1582.4
NC_017305:1295321:129532112953211296010690Corynebacterium pseudotuberculosis PAT10 chromosome, completeCDP-diacylglycerol--inositol 3-phosphatidyltransferase4e-1581.3
NC_017303:1297793:129779312977931298482690Corynebacterium pseudotuberculosis I19 chromosome, complete genomeCDP-diacylglycerol--inositol 3-phosphatidyltransferase4e-1581.3
NC_017301:1297649:129764912976491298338690Corynebacterium pseudotuberculosis C231 chromosome, completeCDP-diacylglycerol--inositol 3-phosphatidyltransferase4e-1581.3
NC_017300:1295344:129534412953441296033690Corynebacterium pseudotuberculosis 1002 chromosome, completeCDP-diacylglycerol--inositol 3-phosphatidyltransferase4e-1581.3
NC_017031:1298450:129776812977681298457690Corynebacterium pseudotuberculosis P54B96 chromosome, completeCDP-diacylglycerol--inositol 3-phosphatidyltransferase4e-1581.3
NC_014329:1298644:129796212979621298651690Corynebacterium pseudotuberculosis FRC41 chromosome, completephosphatidylglycerophosphate synthase4e-1581.3
NC_010545:1089286:110623611062361106880645Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein4e-1477.8
NC_021064:1211480:123628212362821236920639Propionibacterium avidum 44067, complete genomeCDP-alcohol phosphatidyltransferase8e-1476.6
NC_013894:672840:696029696029696604576Thermocrinis albus DSM 14484 chromosome, complete genomeCDP-alcohol phosphatidyltransferase6e-1373.9
NC_013174:1459730:147276714727671473390624Jonesia denitrificans DSM 20603, complete genomeCDP-alcohol phosphatidyltransferase4e-1271.2
NC_015562:1816000:1836676183667618379621287Methanotorris igneus Kol 5 chromosome, complete genomeCDP-alcohol phosphatidyltransferase5e-1270.9
NC_015518:1052701:107125110712511071826576Acidianus hospitalis W1 chromosome, complete genomeCDP-alcohol phosphatidyltransferase8e-1270.1
NC_014122:393856:4116714116714129391269Methanocaldococcus infernus ME chromosome, complete genomeCDP-alcohol phosphatidyltransferase3e-1168.2
NC_012438:50845:716277162772250624Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCDP-alcohol phosphatidyltransferase1e-1065.9
NC_017276:1335474:135406313540631354650588Sulfolobus islandicus REY15A chromosome, complete genomeCDP-alcohol phosphatidyltransferase5e-1064.3
NC_017275:1486526:150511415051141505701588Sulfolobus islandicus HVE10/4 chromosome, complete genomeCDP-alcohol phosphatidyltransferase5e-1064.3
NC_016645:343946:362730362730363290561Pyrobaculum sp. 1860 chromosome, complete genomeCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase5e-1064.3
NC_012589:1531725:155031415503141550901588Sulfolobus islandicus L.S.2.15, complete genomeCDP-alcohol phosphatidyltransferase6e-1063.9
NC_012622:1421098:143968714396871440274588Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCDP-alcohol phosphatidyltransferase6e-1063.9
NC_012632:1568170:158675915867591587346588Sulfolobus islandicus M.16.27 chromosome, complete genomeCDP-alcohol phosphatidyltransferase6e-1063.9
NC_013769:1528196:154678615467861547373588Sulfolobus islandicus L.D.8.5 chromosome, complete genomeCDP-alcohol phosphatidyltransferase6e-1063.9
NC_015320:1260344:128134412813441281916573Archaeoglobus veneficus SNP6 chromosome, complete genomeCDP-alcohol phosphatidyltransferase8e-1063.5
NC_012726:1431745:145033414503341450921588Sulfolobus islandicus M.16.4 chromosome, complete genomeCDP-alcohol phosphatidyltransferase9e-1063.2
NC_012588:1443753:146234214623421462929588Sulfolobus islandicus M.14.25 chromosome, complete genomeCDP-alcohol phosphatidyltransferase9e-1063.2
NC_013926:1166454:117953411795341180136603Aciduliprofundum boonei T469 chromosome, complete genomeCDP-alcohol phosphatidyltransferase1e-0963.2
NC_016781:1297782:129778212977821298258477Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeCDP-diacylglycerol--inositol 3-phosphatidyltransferase1e-0859.7
NC_015435:310406:328966328966329541576Metallosphaera cuprina Ar-4 chromosome, complete genomeCDP-alcohol phosphatidyltransferase1e-0859.3
NC_003364:1282000:128380712838071284349543Pyrobaculum aerophilum str. IM2, complete genomeCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA)2e-0858.5
NC_007181:1295956:131586913158691316447579Sulfolobus acidocaldarius DSM 639, complete genomeCDP-alcohol phosphatidyltransferase2e-0755.8
NC_009440:1857589:185758918575891858164576Metallosphaera sedula DSM 5348 chromosome, complete genomeCDP-alcohol phosphatidyltransferase3e-0755.1
NC_006055:769418:769418769418770035618Mesoplasma florum L1, complete genomephosphatidylglycerophosphate synthase2e-0652.4
NC_006512:696000:709471709471710019549Idiomarina loihiensis L2TR, complete genomePhosphatidylglycerophosphate synthase6e-0650.4
NC_011653:1463743:147326514732651473789525Thermosipho africanus TCF52B, complete genomeCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase9e-0650.1