Pre_GI: BLASTP Hits

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Query: NC_011916:467106:491512 Caulobacter crescentus NA1000 chromosome, complete genome

Start: 491512, End: 493329, Length: 1818

Host Lineage: Caulobacter vibrioides; Caulobacter; Caulobacteraceae; Caulobacterales; Proteobacteria; Bacteria

General Information: Caulobacter crescentus NA1000 is a spontaneous mutant derivative of C. crescentus strain CB15. It is used by labs worldwide because it can easily be synchronized, allowing for studies of the bacterial cell cycle. Caulobacter vibroides, also known as Caulobacter crescentus, inhabits aquatic environments and plays an important part in biogeochemical cycling of organic nutrients. This bacterium undergoes an unusual developmental cycle in which a swarming motile cell becomes a stalked cell that is attached to a solid surface. The stalked cell then undergoes asymmetric cell division and produces one flagellated motile daughter cell and one stalked daughter cell. Thus, the asymmetric processes in this organism provide useful models for differentiation and development. This organism also contains a number of energy-dependent transport system, presumably enabling growth in the substrate-sparse aquatic environments that it lives in.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009484:2660048:2677156267715626790061851Acidiphilium cryptum JF-5 chromosome, complete genomeType IV secretory pathway VirD4 components-like protein7e-144511
NC_015850:1006980:1013904101390410157931890Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein8e-2099.4
NC_012483:3672768:3674604367460436766042001Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein4e-34146
NC_012483:3731542:3752837375283737548311995Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein2e-36154
NC_010606:25090:2655826558287172160Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceType IV secretory pathway, VirD4 component8e-54212
NC_011987:53760:5376053760561232364Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequenceTRAG protein2e-0757.8
NC_020453:3950838:3988683398868339904941812Agromonas oligotrophica S58 DNA, complete genomeputative type IV secretory pathway VirD4 components2e-21104
NC_011891:1225000:1245654124565412471831530Anaeromyxobacter dehalogenans 2CP-1, complete genometype IV secretion system protein VirD44e-44179
NC_014819:25765:4626046260488752616Asticcacaulis excentricus CB 48 plasmid pASTEX02, completehypothetical protein1e-32141
NC_010161:1811000:1811015181101518129311917Bartonella tribocorum CIP 105476, complete genomeVirD4 protein3e-0654.3
NC_010170:3908500:3929234392923439308801647Bordetella petrii, complete genometype IV secretion system protein VirD44e-36153
NC_016626:1751159:1754229175422917558721644Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative TraB protein, type IV secretion system2e-40167
NC_009437:1556934:1568309156830915701471839Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein2e-1171.2
NC_009437:2815500:2820624282062428225101887Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein3e-1377.4
NC_017028:1030000:104422810442281045058831Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeputative conjugative transfer protein TraD1e-1172
NC_014376:3009403:3033976303397630358231848Clostridium saccharolyticum WM1 chromosome, complete genomeTRAG family protein2e-0655.1
NC_014502:113839:1141601141601160821923Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequenceTRAG family protein2e-0654.7
NC_007722:851129:8667998667998691382340Erythrobacter litoralis HTCC2594, complete genomeTraD2e-45184
NC_007722:2954876:2956825295682529590802256Erythrobacter litoralis HTCC2594, complete genomeTraD8e-41168
NC_007722:168937:1869601869601892992340Erythrobacter litoralis HTCC2594, complete genomeTraD1e-45184
NC_009787:17344:4718471869492232Escherichia coli E24377A plasmid pETEC_35, complete sequencetype IV conjugative transfer system coupling protein TraD1e-46188
NC_016631:3917253:3934403393440339363731971Granulicella mallensis MP5ACTX8 chromosome, complete genomeType IV secretion system, TraD, DNA-binding domain protein2e-37157
NC_010337:616304:6198006198006216201821Heliobacterium modesticaldum Ice1, complete genometrag/trad family protein, putative3e-0654.3
NC_016846:24500:5201252012542912280Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer protein TraD3e-47190
NC_010999:561914:5862825862825887412460Lactobacillus casei, complete genomeTRAG protein precursor1e-0758.9
NC_019973:5716453:5719735571973557214801746Mesorhizobium australicum WSM2073, complete genometype IV secretory pathway, VirD4 component2e-0655.1
NC_014923:5787493:5790775579077557925201746Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeTRAG family protein2e-0655.1
NC_015675:6342164:6345446634544663471911746Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTRAG family protein2e-0655.1
NC_010510:339879:3603633603633623541992Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeTRAG family protein2e-0655.1
NC_009488:89844:1125211125211142781758Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-30135
NC_009488:1673756:1685432168543216865771146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-1790.9
NC_009488:1465781:1479205147920514803501146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-1894
NC_009488:1249492:125489812548981255854957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-1895.1
NC_009488:854500:857766857766858722957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-20100
NC_009488:803873:809270809270810226957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-1895.1
NC_009488:1391975:1405801140580114069461146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-1790.9
NC_009488:1430693:143360714336071434488882Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-1170.1
NC_010793:1508974:1513498151349815152521755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-28128
NC_010793:1628500:1641810164181016428201011Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-1998.2
NC_010793:1468849:1468849146884914703841536Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-32142
NC_010793:1158279:1169124116912411708781755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-28128
NC_010793:1811401:1863476186347618652301755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-33145
NC_010793:416849:4208424208424225961755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-28128
NC_015458:327009:3591473591473608261680Pusillimonas sp. T7-7 chromosome, complete genomeTrwB3e-41170
NC_009007:57804:7373273732760142283Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraG7e-40165
NC_017044:702483:7220847220847237781695Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugative transfer protein TraD1e-34148
NC_009998:62000:7347873478756042127Shewanella baltica OS195 plasmid pS19501, complete sequencetype IV conjugative transfer system coupling protein TraD3e-47190
NC_008322:1186000:1186944118694411889171974Shewanella sp. MR-7, complete genomehypothetical protein9e-57221
NC_010660:175200:1802001802001822452046Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence3e-47190
NC_007607:87000:9356593565950791515Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein2e-45184
NC_007385:157516:1664251664251686262202Shigella sonnei Ss046 plasmid pSS_046, complete sequenceTraD protein7e-47189
NC_010943:3069082:3098061309806130999351875Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretory protein conjugation protein TraD2e-1067.8
NC_016582:5987039:6000038600003860017711734Streptomyces bingchenggensis BCW-1 chromosome, complete genomeType IV secretory pathway VirD4 protein-like protein9e-0859.3
NC_011296:281930:2970702970702987821713Thermodesulfovibrio yellowstonii DSM 11347, complete genomeputative conjugative transfer protein TraD9e-38158
NC_007404:1776147:1776147177614717785012355Thiobacillus denitrificans ATCC 25259, complete genomeputative type IV secretory pathway VirD4 components2e-1997.8
NC_004460:708416:7124647124647145572094Vibrio vulnificus CMCP6 chromosome II, complete sequenceType IV secretory pathway, VirD4 component2e-37157