Pre_GI: BLASTP Hits

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Query: NC_011898:1218500:1257836 Clostridium cellulolyticum H10, complete genome

Start: 1257836, End: 1258660, Length: 825

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010001:1884500:189859418985941899421828Clostridium phytofermentans ISDg, complete genometranscriptional regulator, AraC family5e-41168
NC_015690:1542061:156474015647401565588849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator1e-1377.4
NC_016935:2069562:209206820920682092916849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator9e-1374.3
NC_021177:1736854:176858517685851769463879Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator6e-1271.6
NC_010572:6463939:647037164703716471249879Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative AraC-family transcriptional regulator1e-1170.5
NC_019978:2532640:253574925357492536591843Halobacteroides halobius DSM 5150, complete genomeDNA-binding domain-containing protein, AraC-type1e-1170.5
NC_014008:669170:679249679249680019771Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, AraC family3e-1169.3
NC_016609:4331359:433606443360644336966903Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator3e-1168.9
NC_018750:1835500:184518618451861846073888Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, AraC family2e-1066.2
NC_015733:2194676:220721222072122208114903Pseudomonas putida S16 chromosome, complete genomeAraC family transcriptional regulator3e-1065.9
NC_020126:7372685:738728873872887388130843Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator5e-1065.1
NC_011830:1923158:193510919351091935930822Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, AraC family8e-1064.7
NC_003155:4906639:492314449231444923956813Streptomyces avermitilis MA-4680, complete genomeAraC-family transcriptional regulator2e-0963.5
NC_008596:4043213:407143340714334072320888Mycobacterium smegmatis str. MC2 155, complete genomeMmsAB operon regulatory protein2e-0963.5
NC_012731:2302974:233146423314642332342879Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator2e-0963.2
NC_015566:1206500:1238715123871512397521038Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator3e-0962.8
NC_015567:1206727:1238900123890012399371038Serratia sp. AS9 chromosome, complete genomeAraC family transcriptional regulator3e-0962.8
NC_015656:381554:405164405164406126963Frankia symbiont of Datisca glomerata chromosome, complete genomeAraC family transcriptional regulator4e-0962.4
NC_012914:2360989:2375383237538323769751593Paenibacillus sp. JDR-2, complete genometwo component transcriptional regulator, AraC family4e-0962.4
NC_013729:4835452:484434348443434845320978Kribbella flavida DSM 17836, complete genometranscriptional regulator, AraC family4e-0962.4
NC_017030:2728175:273281127328112733692882Corallococcus coralloides DSM 2259 chromosome, complete genomeAraC family transcriptional regulator3e-0962.4
NC_012925:140000:153519153519154355837Streptococcus suis P1/7, complete genomeAraC-family regulatory protein3e-0962.4
NC_012924:142500:153324153324154160837Streptococcus suis SC84, complete genomeAraC family transcriptional regulator3e-0962.4
NC_012926:140000:153303153303154139837Streptococcus suis BM407 chromosome, complete genomeAraC family transcriptional regulator3e-0962.4
NC_011004:5520771:554078055407805541526747Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, AraC family3e-0962.4
NC_009442:142500:153327153327154175849Streptococcus suis 05ZYH33 chromosome, complete genometranscriptional regulator3e-0962.4
NC_009443:142500:153231153231154079849Streptococcus suis 98HAH33, complete genometranscriptional regulator3e-0962.4
NC_016584:487613:499304499304500050747Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator3e-0962.4
NC_005296:5238882:525889052588905259636747Rhodopseudomonas palustris CGA009, complete genomeCUPIN domain:transcriptional regulator, AraC family5e-0962
NC_015136:912276:935323935323936282960Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator4e-0962
NC_012914:5225609:522799552279955228879885Paenibacillus sp. JDR-2, complete genometranscriptional regulator, AraC family6e-0961.2
NC_014366:1663034:1664567166456716656041038Gamma proteobacterium HdN1, complete genometranscriptional regulator, AraC family8e-0961.2
NC_008751:607209:607209607209608048840Desulfovibrio vulgaris subsp. vulgaris DP4, complete genometranscriptional regulator, AraC family1e-0860.5
NC_015563:4206112:422286042228604223852993Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator2e-0860.1
NC_016830:1645879:166343616634361664242807Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator2e-0859.7
NC_020291:5778999:578086057808605781627768Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeTwo component transcriptional regulator, AraC family2e-0859.7
NC_016935:4367000:440287544028754403759885Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0859.3
NC_005966:1832066:184087018408701841769900Acinetobacter sp. ADP1, complete genomeputative transcription regulator (AraC family)3e-0859.3
NC_014924:1701952:171627217162721717261990Pseudoxanthomonas suwonensis 11-1 chromosome, complete genometranscriptional regulator, AraC family3e-0859.3
NC_004547:843475:846356846356847111756Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator3e-0859.3
NC_014624:2569604:257139625713962572262867Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-0858.9
NC_004129:5723787:575189957518995752744846Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family4e-0858.9
NC_013406:3926531:3943386394338639450111626Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator3e-0858.9
NC_011071:1178423:119260511926051193504900Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, AraC family5e-0858.5
NC_003366:461602:477962477962478819858Clostridium perfringens str. 13, complete genomeprobable transcriptional regulator5e-0858.5
NC_008027:2909000:291245129124512913365915Pseudomonas entomophila L48, complete genometranscription regulator, AraC family5e-0858.2
NC_015733:2963548:297143729714372971889453Pseudomonas putida S16 chromosome, complete genomeAraC family transcriptional regulator7e-0858.2
NC_007952:1416000:143102014310201431988969Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, AraC family9e-0857.8
NC_009953:2388605:240436324043632405148786Salinispora arenicola CNS-205 chromosome, complete genomeAraC family transcriptional regulator9e-0857.8
NC_004129:3452885:348470734847073485513807Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family8e-0857.8
NC_014624:2668157:271610827161082716983876Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator8e-0857.8
NC_014622:724000:741909741909742790882Paenibacillus polymyxa SC2 chromosome, complete genomeAraC family transcriptional regulator7e-0857.8
NC_013729:6217500:623254162325416233518978Kribbella flavida DSM 17836, complete genometranscriptional regulator, AraC family1e-0757.4
NC_015589:38418:583045830459131828Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix- domain-containing protein AraC type1e-0757.4
NC_014023:24000:378563785638755900Bacillus megaterium QM B1551 plasmid pBM700, complete sequenceAraC-like ligand binding domain/transcriptional regulator, AraC family1e-0757.4
NC_010322:3315024:332559533255953325978384Pseudomonas putida GB-1 chromosome, complete genomeAraC family transcriptional regulator2e-0757
NC_015638:1824794:184190818419081842846939Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeAraC family transcriptional regulator1e-0757
NC_003228:1045207:106206210620621062958897Bacteroides fragilis NCTC 9343, complete genomeputative AraC transcriptional regulatory protein1e-0757
NC_013729:5982000:598202059820205983000981Kribbella flavida DSM 17836, complete genometranscriptional regulator, AraC family1e-0757
NC_014833:406889:408160408160408990831Ruminococcus albus 7 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_005966:1832066:184434818443481845091744Acinetobacter sp. ADP1, complete genomeputative transcriptional regulator (AraC family)2e-0756.6
NC_016109:3875617:387791638779163878857942Kitasatospora setae KM-6054, complete genomeputative AraC family transcriptional regulator2e-0756.6
NC_013132:3877500:390580239058023906800999Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family2e-0756.6
NC_003888:4613000:461515446151544615969816Streptomyces coelicolor A3(2), complete genomeAraC-family transcriptional regulator2e-0756.2
NC_012914:4238142:4262602426260242636721071Paenibacillus sp. JDR-2, complete genometwo component transcriptional regulator, AraC family3e-0755.8
NC_016582:9551123:955112395511239551986864Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAraC family transcription regulator3e-0755.8
NC_010995:1648897:1664476166447616654831008Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, AraC family3e-0755.8
NC_015977:2280834:229516122951612296024864Roseburia hominis A2-183 chromosome, complete genomeAraC family transcriptional regulator3e-0755.8
NC_014624:1675500:1736220173622017374221203Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-0755.8
NC_013656:2317224:232196023219602322829870Lactococcus lactis subsp. lactis KF147, complete genomeAraC family transcriptional regulator5e-0755.5
NC_013406:3672857:3709192370919237107811590Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator4e-0755.5
NC_015690:1818333:184626218462621847095834Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator4e-0755.5
NC_016935:2347691:237613623761362376969834Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator4e-0755.5
NC_012004:1053682:1068444106844410696071164Streptococcus uberis 0140J, complete genomeAraC family regulatory protein4e-0755.5
NC_016023:755237:762009762009762713705Bacillus coagulans 36D1 chromosome, complete genometwo component AraC family transcriptional regulator4e-0755.5
NC_009654:4624459:463007746300774630919843Marinomonas sp. MWYL1, complete genomeAraC family transcriptional regulator6e-0755.1
NC_020260:2725201:273201127320112732829819Cronobacter sakazakii Sp291, complete genomeAraC family transcriptional regulator5e-0755.1
NC_013406:4478000:448353744835374484400864Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator5e-0755.1
NC_015953:4908069:493169249316924932666975Streptomyces sp. SirexAA-E chromosome, complete genomeAraC family transcriptional regulator5e-0755.1
NC_009348:2362163:238571223857122386632921Aeromonas salmonicida subsp. salmonicida A449, complete genomeAraC family transcriptional regulator6e-0754.7
NC_015732:3105649:310866331086633109505843Spirochaeta caldaria DSM 7334 chromosome, complete genomeAraC family transcriptional regulator7e-0754.7
NC_014206:1694330:172848917284891729271783Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator9e-0754.3
NC_016048:184500:192415192415193263849Oscillibacter valericigenes Sjm18-20, complete genomeputative AraC family transcriptional regulator9e-0754.3
NC_013037:1072266:107226610722661073138873Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family9e-0754.3
NC_015519:1888917:1901250190125019028631614Tepidanaerobacter sp. Re1 chromosome, complete genomeAraC family two component transcriptional regulator8e-0754.3
NC_008027:2909000:290913229091322910049918Pseudomonas entomophila L48, complete genometranscriptional regulator, AraC family8e-0754.3
NC_014538:985339:9853399853399869311593Thermoanaerobacter sp. X513 chromosome, complete genomeAraC family two component transcriptional regulator8e-0754.3
NC_010320:1949852:1967413196741319690051593Thermoanaerobacter sp. X514 chromosome, complete genomeresponse regulator receiver protein8e-0754.3
NC_015559:3511231:351357435135743514419846Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_015186:2197236:221069822106982211576879Acidiphilium multivorum AIU301, complete genomeAraC family transcriptional regulator1e-0653.9
NC_011985:3869998:388680038868003887690891Agrobacterium radiobacter K84 chromosome 1, complete genometranscriptional regulator protein1e-0653.9
NC_010338:426388:446357446357447268912Caulobacter sp. K31, complete genometranscriptional regulator, AraC family1e-0653.9
NC_010501:3013103:301614130161413016962822Pseudomonas putida W619, complete genometranscriptional regulator, AraC family1e-0653.9
NC_014540:1835493:184139518413951842174780Burkholderia sp. CCGE1003 chromosome 2, complete sequenceAraC family transcriptional regulator1e-0653.9
NC_014973:243000:247572247572248330759Geobacter sp. M18 chromosome, complete genometwo component AraC family transcriptional regulator1e-0653.9
NC_013406:3874157:388727238872723888165894Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_012691:2050957:205611820561182057017900Tolumonas auensis DSM 9187, complete genometranscriptional regulator, AraC family1e-0653.9
NC_011898:3973627:399000039900003990797798Clostridium cellulolyticum H10, complete genometranscriptional regulator, AraC family2e-0653.5
NC_016631:3245501:325872632587263259574849Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator1e-0653.5
NC_003485:1707653:1709595170959517108001206Streptococcus pyogenes MGAS8232, complete genomeputative transcriptional regulator1e-0653.5
NC_016935:3819500:385794538579453858871927Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0653.5
NC_009338:2925286:295287329528732953646774Mycobacterium gilvum PYR-GCK chromosome, complete genomehelix-turn-helix domain-containing protein2e-0653.1
NC_013526:65495:659676596766803837Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometranscriptional regulator, AraC family2e-0653.1
NC_014541:1617678:163751416375141638503990Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family2e-0653.1
NC_015690:1726000:174660117466011747449849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_016935:2256000:227664522766452277493849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_015381:3091500:309659930965993097009411Burkholderia gladioli BSR3 chromosome 1, complete sequenceAraC family transcriptional regulator2e-0653.1
NC_013406:5066769:5066769506676950690992331Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_013131:7437831:744729274472927448035744Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, AraC family3e-0652.8
NC_020291:552104:571737571737572579843Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, AraC family3e-0652.8
NC_008573:195317:224184224184225119936Shewanella sp. ANA-3 plasmid 1, complete sequencetranscriptional regulator, AraC family3e-0652.8
NC_005966:1832066:184589118458911846157267Acinetobacter sp. ADP1, complete genomeputative transcriptional regulator (AraC family)3e-0652.8
NC_010505:4990472:501048450104845011467984Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, AraC family3e-0652.8
NC_014258:355845:375318375318376244927Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional Activator RhaS2e-0652.8
NC_015379:4426827:4431388443138844324311044Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AraC family2e-0652.8
NC_012881:1062629:106437510643751065232858Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, AraC family2e-0652.8
NC_020291:5808856:584699158469915847872882Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeAraC-type DNA-binding domain-containing protein2e-0652.8
NC_016002:2825017:284537228453722846346975Pseudogulbenkiania sp. NH8B, complete genomeAraC family transcriptional regulator3e-0652.4
NC_009092:2282437:229102922910292291928900Shewanella loihica PV-4, complete genometranscriptional regulator, AraC family3e-0652.4
NC_010681:1234500:125237712523771253267891Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family4e-0652.4
NC_012914:569471:603552603552604445894Paenibacillus sp. JDR-2, complete genometranscriptional regulator, AraC family5e-0652
NC_013037:5442131:5442852544285254438711020Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family5e-0652
NC_016627:1485799:152182415218241522717894Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA-binding domain-containing protein5e-0652
NC_011146:4505821:451816645181664519101936Geobacter bemidjiensis Bem, complete genometranscriptional regulator, AraC family5e-0652
NC_013592:2968500:299110129911012992003903Dickeya dadantii Ech586, complete genometranscriptional regulator, AraC family5e-0652
NC_010723:2082750:209660120966012097335735Clostridium botulinum E3 str. Alaska E43, complete genomeDNA-bindng response regulator, AraC family5e-0651.6
NC_011769:3712497:371977637197763720675900Desulfovibrio vulgaris str. 'Miyazaki F', complete genometranscriptional regulator, AraC family6e-0651.6
NC_016935:2347691:238530323853032386121819Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator8e-0651.2
NC_021184:3149000:316585831658583166829972Desulfotomaculum gibsoniae DSM 7213, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain8e-0651.2
NC_013204:1759985:1771263177126317723001038Eggerthella lenta DSM 2243, complete genometranscriptional regulator, AraC family7e-0651.2
NC_010067:3753971:377248937724893773352864Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0651.2
NC_009663:946285:951154951154952008855Sulfurovum sp. NBC37-1, complete genomeAraC family transcriptional regulator7e-0651.2
NC_005966:2699483:272476927247692725713945Acinetobacter sp. ADP1, complete genomeputative transcriptional regulator (AraC family)7e-0651.2
NC_010501:3013103:302656130265613027469909Pseudomonas putida W619, complete genometranscriptional regulator, AraC family9e-0650.8
NC_016609:2150863:215929021592902160141852Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator9e-0650.8
NC_019897:3251639:3253455325345532550831629Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain9e-0650.8