Pre_GI: BLASTN Hits

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Query: NC_011896:2775000 Mycobacterium leprae Br4923, complete genome

Start: 2775000, End: 2794815, Length: 19816

Host Lineage: Mycobacterium leprae; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a human skin biopsy in Brazil, and passaged in nude mice and armadillos. The bacterium is a close relative of M. tuberculosis. However, compared to the latter, the genome of M. leprae is smaller due to reductive genome evolution, with many important metabolic activities including siderophore production, part of the oxidative chain, most of the microaerophilic and anaerobic respiratory chains, and numerous catabolic systems and their regulatory circuits eliminated due to extensive recombination events between dispersed repetitive sequences. It is evident that this species has undergone massive genome reduction over time as a result of its parasitic nature, discarding more than half its genes and rendering it the most striking example of genome reduction in a microbial pathogen.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002677:27753652775365279491719553Mycobacterium leprae TN, complete genome019960BLASTN svgBLASTP svg
NC_012559:18880001888000191471626717Laribacter hongkongensis HLHK9, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007404:1964935*1964935200068635752Thiobacillus denitrificans ATCC 25259, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013595:19649319649322011923627Streptosporangium roseum DSM 43021, complete genome9e-0660BLASTN svgBLASTP svg
NC_012207:16819711681971170520423234Mycobacterium bovis BCG str. Tokyo 172, complete genome9e-0660BLASTN svgBLASTP svg
NC_010162:78248787824878785192027043Sorangium cellulosum 'So ce 56', complete genome9e-0660BLASTN svgBLASTP svg
NC_008769:17090781709078173231123234Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome9e-0660BLASTN svgBLASTP svg
NC_002945:16807511680751170398323233Mycobacterium bovis AF2122/97, complete genome9e-0660BLASTN svgBLASTP svg