Pre_GI: BLASTN Hits

Some Help

Query: NC_011896:2660969 Mycobacterium leprae Br4923, complete genome

Start: 2660969, End: 2680099, Length: 19131

Host Lineage: Mycobacterium leprae; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a human skin biopsy in Brazil, and passaged in nude mice and armadillos. The bacterium is a close relative of M. tuberculosis. However, compared to the latter, the genome of M. leprae is smaller due to reductive genome evolution, with many important metabolic activities including siderophore production, part of the oxidative chain, most of the microaerophilic and anaerobic respiratory chains, and numerous catabolic systems and their regulatory circuits eliminated due to extensive recombination events between dispersed repetitive sequences. It is evident that this species has undergone massive genome reduction over time as a result of its parasitic nature, discarding more than half its genes and rendering it the most striking example of genome reduction in a microbial pathogen.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002677:26428602642860268248339624Mycobacterium leprae TN, complete genome036620BLASTN svgBLASTP svg
NC_002677:10965001096500111516918670Mycobacterium leprae TN, complete genome01154BLASTN svgBLASTP svg
NC_011896:10965001096500111521218713Mycobacterium leprae Br4923, complete genome01146BLASTN svgBLASTP svg
NC_011896:56364156364158345319813Mycobacterium leprae Br4923, complete genome01138BLASTN svgBLASTP svg
NC_002677:56350056350058344419945Mycobacterium leprae TN, complete genome01138BLASTN svgBLASTP svg
NC_011896:34746*347465709922354Mycobacterium leprae Br4923, complete genome01130BLASTN svgBLASTP svg
NC_002677:34750*347505709922350Mycobacterium leprae TN, complete genome01130BLASTN svgBLASTP svg
NC_018581:75993275993280124241311Gordonia sp. KTR9 chromosome, complete genome2e-47198BLASTN svgBLASTP svg
NC_009142:515828*51582853593820111Saccharopolyspora erythraea NRRL 2338, complete genome3e-18101BLASTN svgBLASTP svg
NC_014168:3013697*3013697303661322917Segniliparus rotundus DSM 44985 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_015138:46665444666544468852321980Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-0765.9BLASTN svgBLASTP svg
NC_008752:46656994665699468808622388Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010804:25186952518695254148822794Burkholderia multivorans ATCC 17616 chromosome 1, complete9e-0660BLASTN svgBLASTP svg