Pre_GI: BLASTN Hits

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Query: NC_011896:1380000 Mycobacterium leprae Br4923, complete genome

Start: 1380000, End: 1405880, Length: 25881

Host Lineage: Mycobacterium leprae; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a human skin biopsy in Brazil, and passaged in nude mice and armadillos. The bacterium is a close relative of M. tuberculosis. However, compared to the latter, the genome of M. leprae is smaller due to reductive genome evolution, with many important metabolic activities including siderophore production, part of the oxidative chain, most of the microaerophilic and anaerobic respiratory chains, and numerous catabolic systems and their regulatory circuits eliminated due to extensive recombination events between dispersed repetitive sequences. It is evident that this species has undergone massive genome reduction over time as a result of its parasitic nature, discarding more than half its genes and rendering it the most striking example of genome reduction in a microbial pathogen.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002677:13800001380000140585225853Mycobacterium leprae TN, complete genome047780BLASTN svgBLASTP svg
NC_014168:2575799*2575799261011334315Segniliparus rotundus DSM 44985 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012207:2573562*2573562259732923768Mycobacterium bovis BCG str. Tokyo 172, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009525:2635792*2635792265864122850Mycobacterium tuberculosis H37Ra, complete genome3e-0661.9BLASTN svgBLASTP svg