Pre_GI: BLASTP Hits

Some Help

Query: NC_011883:269497:288701 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

Start: 288701, End: 289531, Length: 831

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008751:3214000:321582532158253216673849Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage capsid scaffolding4e-35148
NC_008751:1762562:176433317643331765193861Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage capsid scaffolding4e-35148
NC_013592:804288:830223830223831059837Dickeya dadantii Ech586, complete genomecapsid scaffolding6e-31134
NC_015224:3291736:330998633099863310507522Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Phage capsid scaffolding1e-30133
NC_014500:894136:929517929517930359843Dickeya dadantii 3937 chromosome, complete genomeputative capsid scaffolding protein2e-30133
NC_013892:992811:998643998643999482840Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-28127
NC_012125:894955:929828929828930631804Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-27121
NC_008750:3314309:332613733261373327057921Shewanella sp. W3-18-1, complete genomephage capsid scaffolding4e-26118
NC_009348:4135002:413857741385774139449873Aeromonas salmonicida subsp. salmonicida A449, complete genomephage capsid scaffolding protein1e-25117
NC_015061:2770856:277085627708562771695840Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding3e-24112
NC_011149:2802199:280540128054012806234834Salmonella enterica subsp. enterica serovar Agona str. SL483,phage capsid scaffolding protein1e-23110
NC_009656:5185704:5201873520187352030181146Pseudomonas aeruginosa PA7 chromosome, complete genomescaffold2e-23109
NC_015856:1152021:116838711683871169373987Collimonas fungivorans Ter331 chromosome, complete genomeputative bacteriophage protein5e-23108
NC_011205:2938356:294064529406452941478834Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage capsid scaffolding protein4e-23108
NC_012947:2898179:289874428987442899496753Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecapsid scaffolding4e-23108
NC_016810:2871689:287344528734452874278834Salmonella enterica subsp. enterica serovar Typhimurium strputative capsid protein4e-23108
NC_016857:2871689:287344528734452874278834Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative capsid protein4e-23108
NC_017046:2869873:287218728721872873020834Salmonella enterica subsp. enterica serovar Typhimurium str. 798capsid protein4e-23108
NC_012724:1892000:190577019057701906642873Burkholderia glumae BGR1 chromosome 1, complete genomePhage capsid scaffolding protein1e-22107
NC_016845:1773416:178768417876841788517834Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Presumed capsid scaffolding protein (GpO)2e-22106
NC_003902:3514000:353195935319593532801843Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related capsid scaffold protein2e-22106
NC_006511:2677964:268046026804602681293834Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative capsid protein3e-22105
NC_003198:4453457:449222544922254493058834Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative capsid protein3e-22105
NC_007613:761234:775348775348776181834Shigella boydii Sb227, complete genomeputative capsid scaffolding protein4e-22105
NC_020209:3262000:327625932762593277137879Pseudomonas poae RE*1-1-14, complete genomeputative capsid scafolding protein4e-22105
NC_012660:1737423:174070417407041741582879Pseudomonas fluorescens SBW25 chromosome, complete genomeputative capsid scafolding protein3e-21102
NC_014323:992978:994790994790995632843Herbaspirillum seropedicae SmR1 chromosome, complete genomephage-related capsid scaffold bacteriophage protein2e-21102
NC_012724:147454:150329150329151141813Burkholderia glumae BGR1 chromosome 1, complete genomePhage capsid scaffolding protein (GPO)8e-21100
NC_014837:3766426:377019137701913771024834Pantoea sp. At-9b chromosome, complete genomecapsid scaffolding3e-2099
NC_010943:325739:326789326789327652864Stenotrophomonas maltophilia K279a, complete genomepresumed capsid scaffolding protein (gpo)4e-2098.6
NC_020181:5182568:518371251837125184566855Enterobacter aerogenes EA1509E, complete genomePhage capsid scaffolding protein8e-2097.4
NC_017059:3688688:369059536905953691395801Rhodospirillum photometricum DSM 122, complete genomePhage-related capsid scaffolding protein (GPO-like)8e-2097.4
NC_020211:4598217:460162646016264602441816Serratia marcescens WW4, complete genomephage capsid scaffolding protein GpO1e-1997.1
NC_013008:2824511:282451128245112825365855Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage capsid scaffolding protein GpO2e-1996.7
NC_011353:2825500:282553128255312826385855Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage capsid scaffolding protein GpO2e-1996.7
NC_003295:2111730:211173021117302112569840Ralstonia solanacearum GMI1000, complete genomePROBABLE BACTERIOPHAGE PROTEIN3e-1995.5
NC_020260:312805:331321331321332148828Cronobacter sakazakii Sp291, complete genomecapsid scaffold-like protein7e-1994.7
NC_012917:3565268:358854235885423589396855Pectobacterium carotovorum subsp. carotovorum PC1, complete genomecapsid scaffolding6e-1994.7
NC_014306:1244721:125997012599701260824855Erwinia billingiae Eb661, complete genomecapsid scaffolding protein6e-1994.7
NC_013282:3389619:339300833930083393754747Cronobacter turicensis, complete genomePresumed capsid-scaffolding protein6e-1994.7
NC_017047:1551836:156944015694401570285846Rahnella aquatilis HX2 chromosome, complete genomecapsid scaffolding protein1e-1893.6
NC_016818:1605918:162268916226891623534846Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePhage capsid scaffolding protein (GPO) serine peptidase1e-1893.6
NC_010694:614985:639310639310640173864Erwinia tasmaniensis, complete genomePutative capsid scaffolding protein2e-1892.8
NC_013956:3525711:352816235281623529124963Pantoea ananatis LMG 20103 chromosome, complete genomeO3e-1892.8
NC_007963:1582089:158574715857471586562816Chromohalobacter salexigens DSM 3043, complete genomephage capsid scaffolding4e-1892
NC_009648:3803622:382293638229363823790855Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage capsid scaffolding protein3e-1789.4
NC_016845:4046142:406473640647364065590855Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative prophage capsid scaffolding protein2e-1789.4
NC_015061:1598920:161885616188561619707852Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding2e-1686.7
NC_017047:4037674:405581740558174056668852Rahnella aquatilis HX2 chromosome, complete genomecapsid scaffolding protein2e-1686.3
NC_014306:103545:121387121387122223837Erwinia billingiae Eb661, complete genomePutative phage capsid scaffolding protein3e-1685.9
NC_015061:596247:623225623225624076852Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding6e-1684.7
NC_012962:4942000:495355249535524954388837Photorhabdus asymbiotica, complete genomeputative capsid scaffolding protein1e-1584
NC_008800:1870596:187241418724141873268855Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative phage capsid scaffolding protein2e-1480.1