Pre_GI: BLASTP Hits

Some Help

Query: NC_011883:1601552:1613536 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

Start: 1613536, End: 1613970, Length: 435

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014910:2585747:260199526019952602405411Alicycliphilus denitrificans BC chromosome, complete genomebiopolymer transport protein exbd/tolr4e-1993.6
NC_014540:2908912:291779329177932918215423Burkholderia sp. CCGE1003 chromosome 2, complete sequenceBiopolymer transport protein ExbD/TolR7e-1992.4
NC_014118:2417838:243539924353992435824426Burkholderia sp. CCGE1002 chromosome chromosome 2, completeBiopolymer transport protein ExbD/TolR1e-1892
NC_011992:1505106:150908715090871509497411Acidovorax ebreus TPSY, complete genomeBiopolymer transport protein ExbD/TolR1e-1892
NC_014323:3195178:321381532138153214234420Herbaspirillum seropedicae SmR1 chromosome, complete genomebiopolymer transport ExbD/TolR protein7e-1785.9
NC_007953:1088933:108965810896581090128471Burkholderia xenovorans LB400 chromosome 3, complete sequenceBiopolymer transport protein ExbD/TolR1e-1685.1
NC_010581:561579:582308582308582775468Beijerinckia indica subsp. indica ATCC 9039, complete genomeprotein TolR7e-1682.4
NC_010577:1:121561215612566411Xylella fastidiosa M23, complete genomeBiopolymer transport protein ExbD/TolR8e-1579
NC_002488:1:122851228512707423Xylella fastidiosa 9a5c, complete genomebiopolymer transport ExbD1 protein2e-1478.2
NC_014315:114151:138951138951139397447Nitrosococcus watsoni C-113 chromosome, complete genomeprotein TolR2e-1477.8
NC_009053:1785447:179758017975801797990411Actinobacillus pleuropneumoniae L20, complete genomebiopolymer transport ExbD protein3e-1477
NC_010939:1809446:182146818214681821878411Actinobacillus pleuropneumoniae serovar 7 str. AP76, completebiopolymer transport ExbD protein3e-1477
NC_010278:1749579:175830617583061758716411Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,biopolymer transport ExbD protein3e-1477
NC_006677:1391984:141283914128391413264426Gluconobacter oxydans 621H, complete genomeBiopolymer transport ExbD protein9e-1475.5
NC_014118:2417838:243583424358342436265432Burkholderia sp. CCGE1002 chromosome chromosome 2, completeBiopolymer transport protein ExbD/TolR2e-1374.7
NC_004556:1:122651226512684420Xylella fastidiosa Temecula1, complete genomebiopolymer transport ExbD1 protein2e-1374.3
NC_004578:4465247:448182944818294482293465Pseudomonas syringae pv. tomato str. DC3000, complete genometolR protein6e-1372.8
NC_007613:2981829:300178030017803002205426Shigella boydii Sb227, complete genomeExbD1e-1272
NC_002516:1031386:105456610545661055006441Pseudomonas aeruginosa PAO1, complete genomeTolR protein4e-1270.1
NC_011770:4763506:478338547833854783825441Pseudomonas aeruginosa LESB58, complete genomeTolR protein4e-1270.1
NC_008463:4566976:459652945965294596969441Pseudomonas aeruginosa UCBPP-PA14, complete genomeTolR protein4e-1270.1
NC_018080:4465618:448459944845994485039441Pseudomonas aeruginosa DK2 chromosome, complete genomeTolR protein4e-1270.1
NC_014924:725380:750181750181750609429Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeprotein TolR6e-1269.3
NC_011071:10842:124281242812853426Stenotrophomonas maltophilia R551-3, complete genomeBiopolymer transport protein ExbD/TolR7e-1269.3
NC_011296:909558:929488929488929892405Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTolR protein1e-1168.6
NC_008783:145305:159281159281159733453Bartonella bacilliformis KC583, complete genomeprotein TolR2e-1167.8
NC_010943:9294:122121221212637426Stenotrophomonas maltophilia K279a, complete genomeputative biopolymer transport ExbD1 protein5e-1166.6
NC_014217:800406:801486801486802025540Starkeya novella DSM 506 chromosome, complete genomeTonB system transport protein ExbD5e-1166.2
NC_008011:860000:873921873921874355435Lawsonia intracellularis PHE/MN1-00, complete genomeBiopolymer transport protein5e-1166.2
NC_013209:2414500:242392024239202424369450Acetobacter pasteurianus IFO 3283-01, complete genomeExbD/TolR7e-1165.9
NC_017100:2414075:242512724251272425576450Acetobacter pasteurianus IFO 3283-03, complete genomeExbD/TolR7e-1165.9
NC_017108:2413000:242246424224642422913450Acetobacter pasteurianus IFO 3283-12, complete genomeExbD/TolR7e-1165.9
NC_017111:2413000:242248224224822422931450Acetobacter pasteurianus IFO 3283-32, complete genomeExbD/TolR7e-1165.9
NC_017121:2413000:242246924224692422918450Acetobacter pasteurianus IFO 3283-07, complete genomeExbD/TolR7e-1165.9
NC_017125:2415500:242510724251072425556450Acetobacter pasteurianus IFO 3283-22, complete genomeExbD/TolR7e-1165.9
NC_017146:2416000:242514924251492425598450Acetobacter pasteurianus IFO 3283-26, complete genomeExbD/TolR7e-1165.9
NC_008340:277223:278226278226278675450Alkalilimnicola ehrlichei MLHE-1, complete genomeBiopolymer transport protein ExbD/TolR9e-1165.5
NC_010943:9294:126411264113054414Stenotrophomonas maltophilia K279a, complete genomeputative biopolymer transport ExbD2 protein9e-1165.5
NC_011071:10842:128571285713270414Stenotrophomonas maltophilia R551-3, complete genomeBiopolymer transport protein ExbD/TolR9e-1165.5
NC_004129:5481629:549889654988965499348453Pseudomonas fluorescens Pf-5, complete genomebiopolymer transport protein TolR1e-1065.1
NC_004757:230541:250127250127250543417Nitrosomonas europaea ATCC 19718, complete genomeBiopolymer transport protein ExbD/TolR2e-1064.7
NC_014733:107394:133229133229133636408Methylovorus sp. MP688 chromosome, complete genomebiopolymer transport protein exbd/tolr2e-1064.3
NC_016024:156000:161382161382161813432Candidatus Chloracidobacterium thermophilum B chromosome chromosomebiopolymer transport protein3e-1063.5
NC_018012:1935500:195440119544011954844444Thiocystis violascens DSM 198 chromosome, complete genomecell division and transport-associated protein TolR6e-1063.2
NC_014166:2319447:233680523368052337194390Arcobacter nitrofigilis DSM 7299 chromosome, complete genomebiopolymer transport protein ExbD/TolR8e-1062.4
NC_017187:1511567:152020815202081520597390Arcobacter butzleri ED-1, complete genomebiopolymer transport protein ExbD9e-1062.4
NC_009850:1601982:160470116047011605090390Arcobacter butzleri RM4018, complete genomebiopolymer transport protein ExbD9e-1062.4
NC_005810:3333000:333768233376823338113432Yersinia pestis biovar Microtus str. 91001, complete genomebiopolymer transport protein ExbD5e-0959.7
NC_010159:259695:276883276883277314432Yersinia pestis Angola, complete genometonB system transport protein ExbD5e-0959.7
NC_003143:741169:745740745740746171432Yersinia pestis CO92, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_004088:3859173:387636138763613876792432Yersinia pestis KIM, complete genomeTonB-complex protein5e-0959.7
NC_006155:3992818:401514240151424015567426Yersinia pseudotuberculosis IP 32953, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_010634:3905369:392659939265993927030432Yersinia pseudotuberculosis PB1/+, complete genomeTonB system transport protein ExbD5e-0959.7
NC_010465:733916:737503737503737934432Yersinia pseudotuberculosis YPIII, complete genomeTonB system transport protein ExbD5e-0959.7
NC_009708:692508:697133697133697564432Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebiopolymer transport protein ExbD5e-0959.7
NC_014029:792719:797284797284797715432Yersinia pestis Z176003 chromosome, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_009381:522731:527308527308527733426Yersinia pestis Pestoides F chromosome, complete genomebiopolymer transport protein ExbD5e-0959.7
NC_008149:650706:655283655283655708426Yersinia pestis Nepal516, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_008150:3430000:344724334472433447668426Yersinia pestis Antiqua, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_017265:3724500:374172137417213742152432Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,membrane spanning protein in TonB-ExbB-ExbD complex5e-0959.7
NC_017168:341233:359131359131359562432Yersinia pestis A1122 chromosome, complete genomebiopolymer transport protein ExbD5e-0959.7
NC_017160:737000:741625741625742056432Yersinia pestis D182038 chromosome, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_017154:734875:739446739446739877432Yersinia pestis D106004 chromosome, complete genomeExbD/TolR-family transport protein5e-0959.7
NC_017192:2114433:212032021203202120709390Arcobacter sp. L, complete genomebiopolymer transport protein ExbD7e-0959.3
NC_008783:177161:185469185469185927459Bartonella bacilliformis KC583, complete genomeTonB system transport protein ExbD1e-0858.5
NC_005773:208000:230750230750231175426Pseudomonas syringae pv. phaseolicola 1448A, complete genomeTonB system transport protein ExbD11e-0858.5
NC_010577:1:125731257312983411Xylella fastidiosa M23, complete genomeBiopolymer transport protein ExbD/TolR2e-0858.2
NC_004556:1:126911269113101411Xylella fastidiosa Temecula1, complete genomebiopolymer transport ExbD2 protein2e-0858.2
NC_002488:1:127111271113121411Xylella fastidiosa 9a5c, complete genomebiopolymer transport ExbD2 protein4e-0857
NC_014394:2765261:278552127855212785928408Gallionella capsiferriformans ES-2 chromosome, complete genomeprotein TolR5e-0856.6
NC_008800:3955284:397258139725813973006426Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,biopolymer transport protein ExbD9e-0855.5
NC_015224:3820338:385084438508443851269426Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,biopolymer transport protein ExbD1e-0755.1
NC_007404:387827:389505389505389912408Thiobacillus denitrificans ATCC 25259, complete genomebiopolymer transport protein, ExbD/TolR family1e-0755.1
NC_008027:5576458:559502655950265595427402Pseudomonas entomophila L48, complete genomeBiopolymer transport protein ExbD/TolR2e-0754.7
NC_002929:3568106:356810635681063568564459Bordetella pertussis Tohama I, complete genomeputative TolR-like translocation protein3e-0753.9
NC_008599:1489868:149940114994011499793393Campylobacter fetus subsp. fetus 82-40, complete genomeexbd olr family transport protein5e-0753.1
NC_015726:2817352:283644228364422836885444Cupriavidus necator N-1 chromosome 1, complete sequencebiopolymer transport protein ExbD1e-0652.4
NC_002977:2407392:242890124289012429305405Methylococcus capsulatus str. Bath, complete genomebiopolymer transport protein, ExbD/TolR family1e-0652
NC_007973:2888824:291116429111642911601438Ralstonia metallidurans CH34 chromosome 1, complete sequenceBiopolymer transport protein ExbD/TolR1e-0652
NC_014311:2733897:273631027363102736744435Ralstonia solanacearum PSI07 chromosome, complete genomeprotein tolR, component of the tol-pal system1e-0652
NC_012440:373863:380844380844381248405Persephonella marina EX-H1, complete genomebiopolymer transport protein ExbD1e-0652
NC_011000:3493575:349740734974073497856450Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative TolR-related protein2e-0651.2
NC_008060:341851:356451356451356900450Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceBiopolymer transport protein ExbD/TolR2e-0651.2
NC_016024:156000:161937161937162368432Candidatus Chloracidobacterium thermophilum B chromosome chromosomebiopolymer transport protein3e-0650.8
NC_008781:3056407:307737830773783077812435Polaromonas naphthalenivorans CJ2, complete genomeBiopolymer transport protein ExbD/TolR5e-0649.7