Query: NC_011770:4591500 Pseudomonas aeruginosa LESB58, complete genome
Start: 4591500, End: 4609795, Length: 18296
Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_002516:1236644* | 1236644 | 1263166 | 26523 | Pseudomonas aeruginosa PAO1, complete genome | 0 | 11440 | BLASTN svg | BLASTP svg |
NC_008463:4389721* | 4389721 | 4416635 | 26915 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 0 | 9509 | BLASTN svg | BLASTP svg |
NC_009439:3485000 | 3485000 | 3507217 | 22218 | Pseudomonas mendocina ymp, complete genome | 0 | 2928 | BLASTN svg | BLASTP svg |
NC_015410:3791500* | 3791500 | 3812925 | 21426 | Pseudomonas mendocina NK-01 chromosome, complete genome | 0 | 2789 | BLASTN svg | BLASTP svg |
NC_009434:1743696 | 1743696 | 1764099 | 20404 | Pseudomonas stutzeri A1501, complete genome | 0 | 2748 | BLASTN svg | BLASTP svg |
NC_015740:1594376 | 1594376 | 1616347 | 21972 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 0 | 2744 | BLASTN svg | BLASTP svg |
NC_015556:1899850 | 1899850 | 1921838 | 21989 | Pseudomonas fulva 12-X chromosome, complete genome | 0 | 2593 | BLASTN svg | BLASTP svg |
NC_005773:4282840* | 4282840 | 4314121 | 31282 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 0 | 2357 | BLASTN svg | BLASTP svg |
NC_012660:5242392 | 5242392 | 5268029 | 25638 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 0 | 1045 | BLASTN svg | BLASTP svg |
NC_002516:4321000* | 4321000 | 4342099 | 21100 | Pseudomonas aeruginosa PAO1, complete genome | 0 | 789 | BLASTN svg | BLASTP svg |
NC_011901:2739984 | 2739984 | 2762224 | 22241 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 0 | 777 | BLASTN svg | BLASTP svg |
NC_013889:1514799* | 1514799 | 1535427 | 20629 | Thioalkalivibrio sp. K90mix chromosome, complete genome | 0 | 755 | BLASTN svg | BLASTP svg |
NC_016002:1975000* | 1975000 | 2024947 | 49948 | Pseudogulbenkiania sp. NH8B, complete genome | 0 | 650 | BLASTN svg | BLASTP svg |
NC_005085:2457295 | 2457295 | 2484283 | 26989 | Chromobacterium violaceum ATCC 12472, complete genome | 5e-177 | 628 | BLASTN svg | BLASTP svg |
NC_008463:1188951* | 1188951 | 1207599 | 18649 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 7e-176 | 624 | BLASTN svg | BLASTP svg |
NC_007347:3204637 | 3204637 | 3235485 | 30849 | Ralstonia eutropha JMP134 chromosome 1, complete sequence | 5e-152 | 545 | BLASTN svg | BLASTP svg |
NC_019902:2372097 | 2372097 | 2392858 | 20762 | Thioalkalivibrio nitratireducens DSM 14787, complete genome | 3e-141 | 509 | BLASTN svg | BLASTP svg |
NC_007404:2048000 | 2048000 | 2068961 | 20962 | Thiobacillus denitrificans ATCC 25259, complete genome | 4e-125 | 456 | BLASTN svg | BLASTP svg |
NC_019940:1309359 | 1309359 | 1331976 | 22618 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 5e-109 | 402 | BLASTN svg | BLASTP svg |
NC_011206:2239109 | 2239109 | 2259429 | 20321 | Acidithiobacillus ferrooxidans ATCC 53993, complete genome | 3e-107 | 396 | BLASTN svg | BLASTP svg |
NC_010645:3239420* | 3239420 | 3261669 | 22250 | Bordetella avium 197N, complete genome | 3e-95 | 357 | BLASTN svg | BLASTP svg |
NC_015942:2544407 | 2544407 | 2568352 | 23946 | Acidithiobacillus ferrivorans SS3 chromosome, complete genome | 1e-84 | 321 | BLASTN svg | BLASTP svg |
NC_013959:2666321 | 2666321 | 2692608 | 26288 | Sideroxydans lithotrophicus ES-1 chromosome, complete genome | 1e-66 | 262 | BLASTN svg | BLASTP svg |
NC_007925:3911323 | 3911323 | 3933151 | 21829 | Rhodopseudomonas palustris BisB18, complete genome | 2e-49 | 204 | BLASTN svg | BLASTP svg |
NC_007005:4411388 | 4411388 | 4446430 | 35043 | Pseudomonas syringae pv. syringae B728a, complete genome | 5e-32 | 147 | BLASTN svg | BLASTP svg |
NC_015947:223184 | 223184 | 247485 | 24302 | Burkholderia sp. JV3 chromosome, complete genome | 4e-26 | 127 | BLASTN svg | BLASTP svg |
NC_008095:6323456 | 6323456 | 6348437 | 24982 | Myxococcus xanthus DK 1622, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_015850:2147682 | 2147682 | 2179606 | 31925 | Acidithiobacillus caldus SM-1 chromosome, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_015711:8169752 | 8169752 | 8210337 | 40586 | Myxococcus fulvus HW-1 chromosome, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_019902:2306961 | 2306961 | 2331612 | 24652 | Thioalkalivibrio nitratireducens DSM 14787, complete genome | 1e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014972:2371647 | 2371647 | 2399641 | 27995 | Desulfobulbus propionicus DSM 2032 chromosome, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007510:2284000 | 2284000 | 2306200 | 22201 | Burkholderia sp. 383 chromosome 1, complete sequence | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008463:5246954 | 5246954 | 5306710 | 59757 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_015953:4908069* | 4908069 | 4936396 | 28328 | Streptomyces sp. SirexAA-E chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002516:1031386* | 1031386 | 1091964 | 60579 | Pseudomonas aeruginosa PAO1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |